Gene : Cagra.1194s0044 C. grandiflora v1.1
Defline:  (1 of 3) PTHR11863:SF33 - LATHOSTEROL OXIDASE Genomic Order:  44
Name:  ? Cagra.1194s0044 Secondary Identifier:  ? PAC:28912794
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-2541 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1194s0044 0.5kb upstream 0.5kb upstream 1838 true Scaffold1194: 130954-132791 Capsella grandiflora
Cagra.1194s0044 0.5kb upstream 0.5kb upstream 500 false Scaffold1194: 132292-132791 Capsella grandiflora
Cagra.1194s0044 0.5kb downstream 0.5kb downstream 1838 true Scaffold1194: 130454-132291 Capsella grandiflora
Cagra.1194s0044 0.5kb downstream 0.5kb downstream 500 false Scaffold1194: 130454-130953 Capsella grandiflora
Cagra.1194s0044 1.0kb upstream 1.0kb upstream 2338 true Scaffold1194: 130954-133291 Capsella grandiflora
Cagra.1194s0044 1.0kb upstream 1.0kb upstream 1000 false Scaffold1194: 132292-133291 Capsella grandiflora
Cagra.1194s0044 1.0kb downstream 1.0kb downstream 2338 true Scaffold1194: 129954-132291 Capsella grandiflora
Cagra.1194s0044 1.0kb downstream 1.0kb downstream 1000 false Scaffold1194: 129954-130953 Capsella grandiflora
Cagra.1194s0044 2.0kb upstream 2.0kb upstream 3338 true Scaffold1194: 130954-134291 Capsella grandiflora
Cagra.1194s0044 2.0kb upstream 2.0kb upstream 2000 false Scaffold1194: 132292-134291 Capsella grandiflora
Cagra.1194s0044 2.0kb downstream 2.0kb downstream 3338 true Scaffold1194: 128954-132291 Capsella grandiflora
Cagra.1194s0044 2.0kb downstream 2.0kb downstream 2000 false Scaffold1194: 128954-130953 Capsella grandiflora
Cagra.1194s0044 5.0kb upstream 5.0kb upstream 6338 true Scaffold1194: 130954-137291 Capsella grandiflora
Cagra.1194s0044 5.0kb upstream 5.0kb upstream 5000 false Scaffold1194: 132292-137291 Capsella grandiflora
Cagra.1194s0044 5.0kb downstream 5.0kb downstream 6338 true Scaffold1194: 125954-132291 Capsella grandiflora
Cagra.1194s0044 5.0kb downstream 5.0kb downstream 5000 false Scaffold1194: 125954-130953 Capsella grandiflora
Cagra.1194s0044 10.0kb upstream 10.0kb upstream 11338 true Scaffold1194: 130954-142291 Capsella grandiflora
Cagra.1194s0044 10.0kb upstream 10.0kb upstream 10000 false Scaffold1194: 132292-142291 Capsella grandiflora
Cagra.1194s0044 10.0kb downstream 10.0kb downstream 11338 true Scaffold1194: 120954-132291 Capsella grandiflora
Cagra.1194s0044 10.0kb downstream 10.0kb downstream 10000 false Scaffold1194: 120954-130953 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121512031 5273 Angiosperm View MSA
122380097 5261 Brassicaceae View MSA
123802558 5264 Brassicales-Malvales View MSA
124299745 5266 SBM View MSA
124151074 5268 Malvidae View MSA
123876583 5270 Rosid View MSA
123460240 5271 Pentapetalae View MSA
122495617 5272 Eudicot View MSA
120785057 5274 Embryophyte View MSA
123426408 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain