Gene : Cagra.1268s0020 C. grandiflora v1.1
Defline:  (1 of 2) PTHR10527//PTHR10527:SF29 - IMPORTIN BETA Genomic Order:  20
Name:  ? Cagra.1268s0020 Secondary Identifier:  ? PAC:28893597
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1268s0020 0.5kb upstream 0.5kb upstream 6870 true Scaffold1268: 58272-65141 Capsella grandiflora
Cagra.1268s0020 0.5kb upstream 0.5kb upstream 500 false Scaffold1268: 58272-58771 Capsella grandiflora
Cagra.1268s0020 0.5kb downstream 0.5kb downstream 6870 true Scaffold1268: 58772-65641 Capsella grandiflora
Cagra.1268s0020 0.5kb downstream 0.5kb downstream 500 false Scaffold1268: 65142-65641 Capsella grandiflora
Cagra.1268s0020 1.0kb upstream 1.0kb upstream 7370 true Scaffold1268: 57772-65141 Capsella grandiflora
Cagra.1268s0020 1.0kb upstream 1.0kb upstream 1000 false Scaffold1268: 57772-58771 Capsella grandiflora
Cagra.1268s0020 1.0kb downstream 1.0kb downstream 7370 true Scaffold1268: 58772-66141 Capsella grandiflora
Cagra.1268s0020 1.0kb downstream 1.0kb downstream 1000 false Scaffold1268: 65142-66141 Capsella grandiflora
Cagra.1268s0020 2.0kb upstream 2.0kb upstream 8370 true Scaffold1268: 56772-65141 Capsella grandiflora
Cagra.1268s0020 2.0kb upstream 2.0kb upstream 2000 false Scaffold1268: 56772-58771 Capsella grandiflora
Cagra.1268s0020 2.0kb downstream 2.0kb downstream 8370 true Scaffold1268: 58772-67141 Capsella grandiflora
Cagra.1268s0020 2.0kb downstream 2.0kb downstream 2000 false Scaffold1268: 65142-67141 Capsella grandiflora
Cagra.1268s0020 5.0kb upstream 5.0kb upstream 11370 true Scaffold1268: 53772-65141 Capsella grandiflora
Cagra.1268s0020 5.0kb upstream 5.0kb upstream 5000 false Scaffold1268: 53772-58771 Capsella grandiflora
Cagra.1268s0020 5.0kb downstream 5.0kb downstream 11370 true Scaffold1268: 58772-70141 Capsella grandiflora
Cagra.1268s0020 5.0kb downstream 5.0kb downstream 5000 false Scaffold1268: 65142-70141 Capsella grandiflora
Cagra.1268s0020 10.0kb upstream 10.0kb upstream 16370 true Scaffold1268: 48772-65141 Capsella grandiflora
Cagra.1268s0020 10.0kb upstream 10.0kb upstream 10000 false Scaffold1268: 48772-58771 Capsella grandiflora
Cagra.1268s0020 10.0kb downstream 10.0kb downstream 16370 true Scaffold1268: 58772-75141 Capsella grandiflora
Cagra.1268s0020 10.0kb downstream 10.0kb downstream 10000 false Scaffold1268: 65142-75141 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375816 5261 Brassicaceae View MSA
123828647 5264 Brassicales-Malvales View MSA
124344328 5266 SBM View MSA
124238546 5268 Malvidae View MSA
124071324 5270 Rosid View MSA
123743954 5271 Pentapetalae View MSA
122786465 5272 Eudicot View MSA
122043271 5273 Angiosperm View MSA
121344814 5274 Embryophyte View MSA
123426355 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain