Gene : Cagra.0914s0009 C. grandiflora v1.1
Defline:  (1 of 1) PTHR22912:SF48 - NADPH-DEPENDENT THIOREDOXIN REDUCTASE 3 Genomic Order:  9
Name:  ? Cagra.0914s0009 Secondary Identifier:  ? PAC:28910534
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora THIOREDOX-PWY Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0914s0009 0.5kb upstream 0.5kb upstream 3718 true Scaffold914: 39736-43453 Capsella grandiflora
Cagra.0914s0009 0.5kb upstream 0.5kb upstream 500 false Scaffold914: 39736-40235 Capsella grandiflora
Cagra.0914s0009 0.5kb downstream 0.5kb downstream 3718 true Scaffold914: 40236-43953 Capsella grandiflora
Cagra.0914s0009 0.5kb downstream 0.5kb downstream 500 false Scaffold914: 43454-43953 Capsella grandiflora
Cagra.0914s0009 1.0kb upstream 1.0kb upstream 4218 true Scaffold914: 39236-43453 Capsella grandiflora
Cagra.0914s0009 1.0kb upstream 1.0kb upstream 1000 false Scaffold914: 39236-40235 Capsella grandiflora
Cagra.0914s0009 1.0kb downstream 1.0kb downstream 4218 true Scaffold914: 40236-44453 Capsella grandiflora
Cagra.0914s0009 1.0kb downstream 1.0kb downstream 1000 false Scaffold914: 43454-44453 Capsella grandiflora
Cagra.0914s0009 2.0kb upstream 2.0kb upstream 5218 true Scaffold914: 38236-43453 Capsella grandiflora
Cagra.0914s0009 2.0kb upstream 2.0kb upstream 2000 false Scaffold914: 38236-40235 Capsella grandiflora
Cagra.0914s0009 2.0kb downstream 2.0kb downstream 5218 true Scaffold914: 40236-45453 Capsella grandiflora
Cagra.0914s0009 2.0kb downstream 2.0kb downstream 2000 false Scaffold914: 43454-45453 Capsella grandiflora
Cagra.0914s0009 5.0kb upstream 5.0kb upstream 8218 true Scaffold914: 35236-43453 Capsella grandiflora
Cagra.0914s0009 5.0kb upstream 5.0kb upstream 5000 false Scaffold914: 35236-40235 Capsella grandiflora
Cagra.0914s0009 5.0kb downstream 5.0kb downstream 8218 true Scaffold914: 40236-48453 Capsella grandiflora
Cagra.0914s0009 5.0kb downstream 5.0kb downstream 5000 false Scaffold914: 43454-48453 Capsella grandiflora
Cagra.0914s0009 10.0kb upstream 10.0kb upstream 13218 true Scaffold914: 30236-43453 Capsella grandiflora
Cagra.0914s0009 10.0kb upstream 10.0kb upstream 10000 false Scaffold914: 30236-40235 Capsella grandiflora
Cagra.0914s0009 10.0kb downstream 10.0kb downstream 13218 true Scaffold914: 40236-53453 Capsella grandiflora
Cagra.0914s0009 10.0kb downstream 10.0kb downstream 10000 false Scaffold914: 43454-53453 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375618 5261 Brassicaceae View MSA
123830381 5264 Brassicales-Malvales View MSA
124340337 5266 SBM View MSA
124243162 5268 Malvidae View MSA
124063608 5270 Rosid View MSA
123745502 5271 Pentapetalae View MSA
122789428 5272 Eudicot View MSA
122046832 5273 Angiosperm View MSA
121345870 5274 Embryophyte View MSA
123426423 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain