Gene : Cagra.0860s0002 C. grandiflora v1.1
Defline:  (1 of 3) PF03435 - Saccharopine dehydrogenase NADP binding domain (Sacchrp_dh_NADP) Genomic Order:  2
Name:  ? Cagra.0860s0002 Secondary Identifier:  ? PAC:28901396
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0860s0002 0.5kb upstream 0.5kb upstream 3262 true Scaffold860: 6131-9392 Capsella grandiflora
Cagra.0860s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold860: 6131-6630 Capsella grandiflora
Cagra.0860s0002 0.5kb downstream 0.5kb downstream 3262 true Scaffold860: 6631-9892 Capsella grandiflora
Cagra.0860s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold860: 9393-9892 Capsella grandiflora
Cagra.0860s0002 1.0kb upstream 1.0kb upstream 3762 true Scaffold860: 5631-9392 Capsella grandiflora
Cagra.0860s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold860: 5631-6630 Capsella grandiflora
Cagra.0860s0002 1.0kb downstream 1.0kb downstream 3762 true Scaffold860: 6631-10392 Capsella grandiflora
Cagra.0860s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold860: 9393-10392 Capsella grandiflora
Cagra.0860s0002 2.0kb upstream 2.0kb upstream 4762 true Scaffold860: 4631-9392 Capsella grandiflora
Cagra.0860s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold860: 4631-6630 Capsella grandiflora
Cagra.0860s0002 2.0kb downstream 2.0kb downstream 4762 true Scaffold860: 6631-11392 Capsella grandiflora
Cagra.0860s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold860: 9393-11392 Capsella grandiflora
Cagra.0860s0002 5.0kb upstream 5.0kb upstream 7762 true Scaffold860: 1631-9392 Capsella grandiflora
Cagra.0860s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold860: 1631-6630 Capsella grandiflora
Cagra.0860s0002 5.0kb downstream 5.0kb downstream 7762 true Scaffold860: 6631-14392 Capsella grandiflora
Cagra.0860s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold860: 9393-14392 Capsella grandiflora
Cagra.0860s0002 10.0kb upstream 10.0kb upstream 9392 true Scaffold860: 1-9392 Capsella grandiflora
Cagra.0860s0002 10.0kb upstream 10.0kb upstream 6630 false Scaffold860: 1-6630 Capsella grandiflora
Cagra.0860s0002 10.0kb downstream 10.0kb downstream 12762 true Scaffold860: 6631-19392 Capsella grandiflora
Cagra.0860s0002 10.0kb downstream 10.0kb downstream 10000 false Scaffold860: 9393-19392 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371104 5261 Brassicaceae View MSA
123828321 5264 Brassicales-Malvales View MSA
124345882 5266 SBM View MSA
124239236 5268 Malvidae View MSA
124065945 5270 Rosid View MSA
123752948 5271 Pentapetalae View MSA
122790267 5272 Eudicot View MSA
122051589 5273 Angiosperm View MSA
121345153 5274 Embryophyte View MSA
123426869 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain