Gene : Cagra.0578s0072 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11977:SF46 - VILLIN-2-RELATED Genomic Order:  72
Name:  ? Cagra.0578s0072 Secondary Identifier:  ? PAC:28898684
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0578s0072 0.5kb upstream 0.5kb upstream 8687 true Scaffold578: 262705-271391 Capsella grandiflora
Cagra.0578s0072 0.5kb upstream 0.5kb upstream 500 false Scaffold578: 270892-271391 Capsella grandiflora
Cagra.0578s0072 0.5kb downstream 0.5kb downstream 8687 true Scaffold578: 262205-270891 Capsella grandiflora
Cagra.0578s0072 0.5kb downstream 0.5kb downstream 500 false Scaffold578: 262205-262704 Capsella grandiflora
Cagra.0578s0072 1.0kb upstream 1.0kb upstream 9187 true Scaffold578: 262705-271891 Capsella grandiflora
Cagra.0578s0072 1.0kb upstream 1.0kb upstream 1000 false Scaffold578: 270892-271891 Capsella grandiflora
Cagra.0578s0072 1.0kb downstream 1.0kb downstream 9187 true Scaffold578: 261705-270891 Capsella grandiflora
Cagra.0578s0072 1.0kb downstream 1.0kb downstream 1000 false Scaffold578: 261705-262704 Capsella grandiflora
Cagra.0578s0072 2.0kb upstream 2.0kb upstream 10187 true Scaffold578: 262705-272891 Capsella grandiflora
Cagra.0578s0072 2.0kb upstream 2.0kb upstream 2000 false Scaffold578: 270892-272891 Capsella grandiflora
Cagra.0578s0072 2.0kb downstream 2.0kb downstream 10187 true Scaffold578: 260705-270891 Capsella grandiflora
Cagra.0578s0072 2.0kb downstream 2.0kb downstream 2000 false Scaffold578: 260705-262704 Capsella grandiflora
Cagra.0578s0072 5.0kb upstream 5.0kb upstream 13187 true Scaffold578: 262705-275891 Capsella grandiflora
Cagra.0578s0072 5.0kb upstream 5.0kb upstream 5000 false Scaffold578: 270892-275891 Capsella grandiflora
Cagra.0578s0072 5.0kb downstream 5.0kb downstream 13187 true Scaffold578: 257705-270891 Capsella grandiflora
Cagra.0578s0072 5.0kb downstream 5.0kb downstream 5000 false Scaffold578: 257705-262704 Capsella grandiflora
Cagra.0578s0072 10.0kb upstream 10.0kb upstream 18187 true Scaffold578: 262705-280891 Capsella grandiflora
Cagra.0578s0072 10.0kb upstream 10.0kb upstream 10000 false Scaffold578: 270892-280891 Capsella grandiflora
Cagra.0578s0072 10.0kb downstream 10.0kb downstream 18187 true Scaffold578: 252705-270891 Capsella grandiflora
Cagra.0578s0072 10.0kb downstream 10.0kb downstream 10000 false Scaffold578: 252705-262704 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371204 5261 Brassicaceae View MSA
123835797 5264 Brassicales-Malvales View MSA
124336767 5266 SBM View MSA
124242323 5268 Malvidae View MSA
124073983 5270 Rosid View MSA
123746997 5271 Pentapetalae View MSA
122787653 5272 Eudicot View MSA
122045206 5273 Angiosperm View MSA
121349269 5274 Embryophyte View MSA
123428280 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain