Gene : Cagra.0096s0073 C. grandiflora v1.1
Defline:  (1 of 11) 6.2.1.3 - Long-chain-fatty-acid--CoA ligase / Lignoceroyl-CoA synthase Genomic Order:  73
Name:  ? Cagra.0096s0073 Secondary Identifier:  ? PAC:28897016
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Sequence Feature Displayer

Ontology Annotation Displayer

13 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-1121 Capsella grandiflora pathologic  
Cgrandiflora PWY-321 Capsella grandiflora pathologic  
Cgrandiflora PWY-5136 Capsella grandiflora pathologic  
Cgrandiflora PWY-5143 Capsella grandiflora pathologic  
Cgrandiflora PWY-5147 Capsella grandiflora pathologic  
Cgrandiflora PWY-5156 Capsella grandiflora pathologic  
Cgrandiflora PWY-561 Capsella grandiflora pathologic  
Cgrandiflora PWY-5885 Capsella grandiflora pathologic  
Cgrandiflora PWY-5971 Capsella grandiflora pathologic  
Cgrandiflora PWY-5989 Capsella grandiflora pathologic  
Cgrandiflora PWY66-389 Capsella grandiflora pathologic  
Cgrandiflora PWY-6733 Capsella grandiflora pathologic  
Cgrandiflora PWY-6803 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0096s0073 0.5kb upstream 0.5kb upstream 4587 true Scaffold96: 358958-363544 Capsella grandiflora
Cagra.0096s0073 0.5kb upstream 0.5kb upstream 500 false Scaffold96: 358958-359457 Capsella grandiflora
Cagra.0096s0073 0.5kb downstream 0.5kb downstream 4587 true Scaffold96: 359458-364044 Capsella grandiflora
Cagra.0096s0073 0.5kb downstream 0.5kb downstream 500 false Scaffold96: 363545-364044 Capsella grandiflora
Cagra.0096s0073 1.0kb upstream 1.0kb upstream 5087 true Scaffold96: 358458-363544 Capsella grandiflora
Cagra.0096s0073 1.0kb upstream 1.0kb upstream 1000 false Scaffold96: 358458-359457 Capsella grandiflora
Cagra.0096s0073 1.0kb downstream 1.0kb downstream 5087 true Scaffold96: 359458-364544 Capsella grandiflora
Cagra.0096s0073 1.0kb downstream 1.0kb downstream 1000 false Scaffold96: 363545-364544 Capsella grandiflora
Cagra.0096s0073 2.0kb upstream 2.0kb upstream 6087 true Scaffold96: 357458-363544 Capsella grandiflora
Cagra.0096s0073 2.0kb upstream 2.0kb upstream 2000 false Scaffold96: 357458-359457 Capsella grandiflora
Cagra.0096s0073 2.0kb downstream 2.0kb downstream 6087 true Scaffold96: 359458-365544 Capsella grandiflora
Cagra.0096s0073 2.0kb downstream 2.0kb downstream 2000 false Scaffold96: 363545-365544 Capsella grandiflora
Cagra.0096s0073 5.0kb upstream 5.0kb upstream 9087 true Scaffold96: 354458-363544 Capsella grandiflora
Cagra.0096s0073 5.0kb upstream 5.0kb upstream 5000 false Scaffold96: 354458-359457 Capsella grandiflora
Cagra.0096s0073 5.0kb downstream 5.0kb downstream 9087 true Scaffold96: 359458-368544 Capsella grandiflora
Cagra.0096s0073 5.0kb downstream 5.0kb downstream 5000 false Scaffold96: 363545-368544 Capsella grandiflora
Cagra.0096s0073 10.0kb upstream 10.0kb upstream 14087 true Scaffold96: 349458-363544 Capsella grandiflora
Cagra.0096s0073 10.0kb upstream 10.0kb upstream 10000 false Scaffold96: 349458-359457 Capsella grandiflora
Cagra.0096s0073 10.0kb downstream 10.0kb downstream 14087 true Scaffold96: 359458-373544 Capsella grandiflora
Cagra.0096s0073 10.0kb downstream 10.0kb downstream 10000 false Scaffold96: 363545-373544 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365174 5261 Brassicaceae View MSA
123832469 5264 Brassicales-Malvales View MSA
124342389 5266 SBM View MSA
124240048 5268 Malvidae View MSA
124061354 5270 Rosid View MSA
123752454 5271 Pentapetalae View MSA
122793433 5272 Eudicot View MSA
122043252 5273 Angiosperm View MSA
121348478 5274 Embryophyte View MSA
123380877 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain