Gene : Cagra.0133s0061 C. grandiflora v1.1
Defline:  (1 of 1) PTHR12741:SF12 - CALLOSE SYNTHASE 9 Genomic Order:  61
Name:  ? Cagra.0133s0061 Secondary Identifier:  ? PAC:28899513
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-6773 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0133s0061 0.5kb upstream 0.5kb upstream 15066 true Scaffold133: 227658-242723 Capsella grandiflora
Cagra.0133s0061 0.5kb upstream 0.5kb upstream 500 false Scaffold133: 242224-242723 Capsella grandiflora
Cagra.0133s0061 0.5kb downstream 0.5kb downstream 15066 true Scaffold133: 227158-242223 Capsella grandiflora
Cagra.0133s0061 0.5kb downstream 0.5kb downstream 500 false Scaffold133: 227158-227657 Capsella grandiflora
Cagra.0133s0061 1.0kb upstream 1.0kb upstream 15566 true Scaffold133: 227658-243223 Capsella grandiflora
Cagra.0133s0061 1.0kb upstream 1.0kb upstream 1000 false Scaffold133: 242224-243223 Capsella grandiflora
Cagra.0133s0061 1.0kb downstream 1.0kb downstream 15566 true Scaffold133: 226658-242223 Capsella grandiflora
Cagra.0133s0061 1.0kb downstream 1.0kb downstream 1000 false Scaffold133: 226658-227657 Capsella grandiflora
Cagra.0133s0061 2.0kb upstream 2.0kb upstream 16566 true Scaffold133: 227658-244223 Capsella grandiflora
Cagra.0133s0061 2.0kb upstream 2.0kb upstream 2000 false Scaffold133: 242224-244223 Capsella grandiflora
Cagra.0133s0061 2.0kb downstream 2.0kb downstream 16566 true Scaffold133: 225658-242223 Capsella grandiflora
Cagra.0133s0061 2.0kb downstream 2.0kb downstream 2000 false Scaffold133: 225658-227657 Capsella grandiflora
Cagra.0133s0061 5.0kb upstream 5.0kb upstream 19566 true Scaffold133: 227658-247223 Capsella grandiflora
Cagra.0133s0061 5.0kb upstream 5.0kb upstream 5000 false Scaffold133: 242224-247223 Capsella grandiflora
Cagra.0133s0061 5.0kb downstream 5.0kb downstream 19566 true Scaffold133: 222658-242223 Capsella grandiflora
Cagra.0133s0061 5.0kb downstream 5.0kb downstream 5000 false Scaffold133: 222658-227657 Capsella grandiflora
Cagra.0133s0061 10.0kb upstream 10.0kb upstream 24566 true Scaffold133: 227658-252223 Capsella grandiflora
Cagra.0133s0061 10.0kb upstream 10.0kb upstream 10000 false Scaffold133: 242224-252223 Capsella grandiflora
Cagra.0133s0061 10.0kb downstream 10.0kb downstream 24566 true Scaffold133: 217658-242223 Capsella grandiflora
Cagra.0133s0061 10.0kb downstream 10.0kb downstream 10000 false Scaffold133: 217658-227657 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363875 5261 Brassicaceae View MSA
123830920 5264 Brassicales-Malvales View MSA
124350687 5266 SBM View MSA
124241987 5268 Malvidae View MSA
124064291 5270 Rosid View MSA
123749286 5271 Pentapetalae View MSA
122796440 5272 Eudicot View MSA
122050431 5273 Angiosperm View MSA
121349066 5274 Embryophyte View MSA
123428420 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain