Gene : Cagra.0147s0019 C. grandiflora v1.1
Defline:  (1 of 2) PTHR10410:SF6 - COP9 SIGNALOSOME COMPLEX SUBUNIT 5 Genomic Order:  19
Name:  ? Cagra.0147s0019 Secondary Identifier:  ? PAC:28896382
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0147s0019 0.5kb upstream 0.5kb upstream 2682 true Scaffold147: 61015-63696 Capsella grandiflora
Cagra.0147s0019 0.5kb upstream 0.5kb upstream 500 false Scaffold147: 63197-63696 Capsella grandiflora
Cagra.0147s0019 0.5kb downstream 0.5kb downstream 2682 true Scaffold147: 60515-63196 Capsella grandiflora
Cagra.0147s0019 0.5kb downstream 0.5kb downstream 500 false Scaffold147: 60515-61014 Capsella grandiflora
Cagra.0147s0019 1.0kb upstream 1.0kb upstream 3182 true Scaffold147: 61015-64196 Capsella grandiflora
Cagra.0147s0019 1.0kb upstream 1.0kb upstream 1000 false Scaffold147: 63197-64196 Capsella grandiflora
Cagra.0147s0019 1.0kb downstream 1.0kb downstream 3182 true Scaffold147: 60015-63196 Capsella grandiflora
Cagra.0147s0019 1.0kb downstream 1.0kb downstream 1000 false Scaffold147: 60015-61014 Capsella grandiflora
Cagra.0147s0019 2.0kb upstream 2.0kb upstream 4182 true Scaffold147: 61015-65196 Capsella grandiflora
Cagra.0147s0019 2.0kb upstream 2.0kb upstream 2000 false Scaffold147: 63197-65196 Capsella grandiflora
Cagra.0147s0019 2.0kb downstream 2.0kb downstream 4182 true Scaffold147: 59015-63196 Capsella grandiflora
Cagra.0147s0019 2.0kb downstream 2.0kb downstream 2000 false Scaffold147: 59015-61014 Capsella grandiflora
Cagra.0147s0019 5.0kb upstream 5.0kb upstream 7182 true Scaffold147: 61015-68196 Capsella grandiflora
Cagra.0147s0019 5.0kb upstream 5.0kb upstream 5000 false Scaffold147: 63197-68196 Capsella grandiflora
Cagra.0147s0019 5.0kb downstream 5.0kb downstream 7182 true Scaffold147: 56015-63196 Capsella grandiflora
Cagra.0147s0019 5.0kb downstream 5.0kb downstream 5000 false Scaffold147: 56015-61014 Capsella grandiflora
Cagra.0147s0019 10.0kb upstream 10.0kb upstream 12182 true Scaffold147: 61015-73196 Capsella grandiflora
Cagra.0147s0019 10.0kb upstream 10.0kb upstream 10000 false Scaffold147: 63197-73196 Capsella grandiflora
Cagra.0147s0019 10.0kb downstream 10.0kb downstream 12182 true Scaffold147: 51015-63196 Capsella grandiflora
Cagra.0147s0019 10.0kb downstream 10.0kb downstream 10000 false Scaffold147: 51015-61014 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376767 5261 Brassicaceae View MSA
123837329 5264 Brassicales-Malvales View MSA
124345719 5266 SBM View MSA
124247743 5268 Malvidae View MSA
124062385 5270 Rosid View MSA
123748125 5271 Pentapetalae View MSA
122791639 5272 Eudicot View MSA
122043693 5273 Angiosperm View MSA
121347496 5274 Embryophyte View MSA
123424807 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain