Gene : Cagra.0007s0047 C. grandiflora v1.1
Defline:  (1 of 2) PTHR32295:SF9 - IQ-DOMAIN 9 PROTEIN Genomic Order:  47
Name:  ? Cagra.0007s0047 Secondary Identifier:  ? PAC:28903201
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0007s0047 0.5kb upstream 0.5kb upstream 1636 true Scaffold7: 169239-170874 Capsella grandiflora
Cagra.0007s0047 0.5kb upstream 0.5kb upstream 500 false Scaffold7: 170375-170874 Capsella grandiflora
Cagra.0007s0047 0.5kb downstream 0.5kb downstream 1636 true Scaffold7: 168739-170374 Capsella grandiflora
Cagra.0007s0047 0.5kb downstream 0.5kb downstream 500 false Scaffold7: 168739-169238 Capsella grandiflora
Cagra.0007s0047 1.0kb upstream 1.0kb upstream 2136 true Scaffold7: 169239-171374 Capsella grandiflora
Cagra.0007s0047 1.0kb upstream 1.0kb upstream 1000 false Scaffold7: 170375-171374 Capsella grandiflora
Cagra.0007s0047 1.0kb downstream 1.0kb downstream 2136 true Scaffold7: 168239-170374 Capsella grandiflora
Cagra.0007s0047 1.0kb downstream 1.0kb downstream 1000 false Scaffold7: 168239-169238 Capsella grandiflora
Cagra.0007s0047 2.0kb upstream 2.0kb upstream 3136 true Scaffold7: 169239-172374 Capsella grandiflora
Cagra.0007s0047 2.0kb upstream 2.0kb upstream 2000 false Scaffold7: 170375-172374 Capsella grandiflora
Cagra.0007s0047 2.0kb downstream 2.0kb downstream 3136 true Scaffold7: 167239-170374 Capsella grandiflora
Cagra.0007s0047 2.0kb downstream 2.0kb downstream 2000 false Scaffold7: 167239-169238 Capsella grandiflora
Cagra.0007s0047 5.0kb upstream 5.0kb upstream 6136 true Scaffold7: 169239-175374 Capsella grandiflora
Cagra.0007s0047 5.0kb upstream 5.0kb upstream 5000 false Scaffold7: 170375-175374 Capsella grandiflora
Cagra.0007s0047 5.0kb downstream 5.0kb downstream 6136 true Scaffold7: 164239-170374 Capsella grandiflora
Cagra.0007s0047 5.0kb downstream 5.0kb downstream 5000 false Scaffold7: 164239-169238 Capsella grandiflora
Cagra.0007s0047 10.0kb upstream 10.0kb upstream 11136 true Scaffold7: 169239-180374 Capsella grandiflora
Cagra.0007s0047 10.0kb upstream 10.0kb upstream 10000 false Scaffold7: 170375-180374 Capsella grandiflora
Cagra.0007s0047 10.0kb downstream 10.0kb downstream 11136 true Scaffold7: 159239-170374 Capsella grandiflora
Cagra.0007s0047 10.0kb downstream 10.0kb downstream 10000 false Scaffold7: 159239-169238 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367612 5261 Brassicaceae View MSA
123828467 5264 Brassicales-Malvales View MSA
124337232 5266 SBM View MSA
124245221 5268 Malvidae View MSA
124064502 5270 Rosid View MSA
123750715 5271 Pentapetalae View MSA
122787136 5272 Eudicot View MSA
122044969 5273 Angiosperm View MSA
121310374 5274 Embryophyte View MSA
123347875 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain