Gene : Cagra.0050s0021 C. grandiflora v1.1
Defline:  (1 of 2) PTHR26402:SF569 - TWO-COMPONENT RESPONSE REGULATOR-LIKE APRR5-RELATED Genomic Order:  21
Name:  ? Cagra.0050s0021 Secondary Identifier:  ? PAC:28917035
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0050s0021 0.5kb upstream 0.5kb upstream 3001 true Scaffold50: 73589-76589 Capsella grandiflora
Cagra.0050s0021 0.5kb upstream 0.5kb upstream 500 false Scaffold50: 76090-76589 Capsella grandiflora
Cagra.0050s0021 0.5kb downstream 0.5kb downstream 3001 true Scaffold50: 73089-76089 Capsella grandiflora
Cagra.0050s0021 0.5kb downstream 0.5kb downstream 500 false Scaffold50: 73089-73588 Capsella grandiflora
Cagra.0050s0021 1.0kb upstream 1.0kb upstream 3501 true Scaffold50: 73589-77089 Capsella grandiflora
Cagra.0050s0021 1.0kb upstream 1.0kb upstream 1000 false Scaffold50: 76090-77089 Capsella grandiflora
Cagra.0050s0021 1.0kb downstream 1.0kb downstream 3501 true Scaffold50: 72589-76089 Capsella grandiflora
Cagra.0050s0021 1.0kb downstream 1.0kb downstream 1000 false Scaffold50: 72589-73588 Capsella grandiflora
Cagra.0050s0021 2.0kb upstream 2.0kb upstream 4501 true Scaffold50: 73589-78089 Capsella grandiflora
Cagra.0050s0021 2.0kb upstream 2.0kb upstream 2000 false Scaffold50: 76090-78089 Capsella grandiflora
Cagra.0050s0021 2.0kb downstream 2.0kb downstream 4501 true Scaffold50: 71589-76089 Capsella grandiflora
Cagra.0050s0021 2.0kb downstream 2.0kb downstream 2000 false Scaffold50: 71589-73588 Capsella grandiflora
Cagra.0050s0021 5.0kb upstream 5.0kb upstream 7501 true Scaffold50: 73589-81089 Capsella grandiflora
Cagra.0050s0021 5.0kb upstream 5.0kb upstream 5000 false Scaffold50: 76090-81089 Capsella grandiflora
Cagra.0050s0021 5.0kb downstream 5.0kb downstream 7501 true Scaffold50: 68589-76089 Capsella grandiflora
Cagra.0050s0021 5.0kb downstream 5.0kb downstream 5000 false Scaffold50: 68589-73588 Capsella grandiflora
Cagra.0050s0021 10.0kb upstream 10.0kb upstream 12501 true Scaffold50: 73589-86089 Capsella grandiflora
Cagra.0050s0021 10.0kb upstream 10.0kb upstream 10000 false Scaffold50: 76090-86089 Capsella grandiflora
Cagra.0050s0021 10.0kb downstream 10.0kb downstream 12501 true Scaffold50: 63589-76089 Capsella grandiflora
Cagra.0050s0021 10.0kb downstream 10.0kb downstream 10000 false Scaffold50: 63589-73588 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364894 5261 Brassicaceae View MSA
123834605 5264 Brassicales-Malvales View MSA
124350739 5266 SBM View MSA
124251308 5268 Malvidae View MSA
124070705 5270 Rosid View MSA
123743844 5271 Pentapetalae View MSA
122796844 5272 Eudicot View MSA
122049378 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121348343 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain