Gene : Cagra.0056s0010 C. grandiflora v1.1
Defline:  (1 of 1) PTHR22763//PTHR22763:SF47 - RING ZINC FINGER PROTEIN Genomic Order:  10
Name:  ? Cagra.0056s0010 Secondary Identifier:  ? PAC:28903239
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0056s0010 0.5kb upstream 0.5kb upstream 3817 true Scaffold56: 44128-47944 Capsella grandiflora
Cagra.0056s0010 0.5kb upstream 0.5kb upstream 500 false Scaffold56: 44128-44627 Capsella grandiflora
Cagra.0056s0010 0.5kb downstream 0.5kb downstream 3817 true Scaffold56: 44628-48444 Capsella grandiflora
Cagra.0056s0010 0.5kb downstream 0.5kb downstream 500 false Scaffold56: 47945-48444 Capsella grandiflora
Cagra.0056s0010 1.0kb upstream 1.0kb upstream 4317 true Scaffold56: 43628-47944 Capsella grandiflora
Cagra.0056s0010 1.0kb upstream 1.0kb upstream 1000 false Scaffold56: 43628-44627 Capsella grandiflora
Cagra.0056s0010 1.0kb downstream 1.0kb downstream 4317 true Scaffold56: 44628-48944 Capsella grandiflora
Cagra.0056s0010 1.0kb downstream 1.0kb downstream 1000 false Scaffold56: 47945-48944 Capsella grandiflora
Cagra.0056s0010 2.0kb upstream 2.0kb upstream 5317 true Scaffold56: 42628-47944 Capsella grandiflora
Cagra.0056s0010 2.0kb upstream 2.0kb upstream 2000 false Scaffold56: 42628-44627 Capsella grandiflora
Cagra.0056s0010 2.0kb downstream 2.0kb downstream 5317 true Scaffold56: 44628-49944 Capsella grandiflora
Cagra.0056s0010 2.0kb downstream 2.0kb downstream 2000 false Scaffold56: 47945-49944 Capsella grandiflora
Cagra.0056s0010 5.0kb upstream 5.0kb upstream 8317 true Scaffold56: 39628-47944 Capsella grandiflora
Cagra.0056s0010 5.0kb upstream 5.0kb upstream 5000 false Scaffold56: 39628-44627 Capsella grandiflora
Cagra.0056s0010 5.0kb downstream 5.0kb downstream 8317 true Scaffold56: 44628-52944 Capsella grandiflora
Cagra.0056s0010 5.0kb downstream 5.0kb downstream 5000 false Scaffold56: 47945-52944 Capsella grandiflora
Cagra.0056s0010 10.0kb upstream 10.0kb upstream 13317 true Scaffold56: 34628-47944 Capsella grandiflora
Cagra.0056s0010 10.0kb upstream 10.0kb upstream 10000 false Scaffold56: 34628-44627 Capsella grandiflora
Cagra.0056s0010 10.0kb downstream 10.0kb downstream 13317 true Scaffold56: 44628-57944 Capsella grandiflora
Cagra.0056s0010 10.0kb downstream 10.0kb downstream 10000 false Scaffold56: 47945-57944 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377079 5261 Brassicaceae View MSA
123840483 5264 Brassicales-Malvales View MSA
124339888 5266 SBM View MSA
124253018 5268 Malvidae View MSA
124072102 5270 Rosid View MSA
123744750 5271 Pentapetalae View MSA
122788933 5272 Eudicot View MSA
122041616 5273 Angiosperm View MSA
121350334 5274 Embryophyte View MSA
123381683 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain