Protein Domain : IPR009068

Type:  Domain Name:  S15/NS1, RNA-binding
Description:  The RNA-binding domains of the ribosomal protein S15 and the influenza virus non-structural protein NS1 share the same structural fold, consisting of three helices in an irregular array. S15 is one of 21 proteins in the small, bacterial 30S ribosomal subunit, and is required for assembly of the subunit through its binding to 16S rRNA []. The multifunctional glutamyl-prolyl-tRNA synthase (EPRS) contains three tandem repeats linking two catalytic domains, all three of which contribute to RNA-binding; the second repeated element bears structural resemblance to the S15/NS1 RNA-binding domain []. Short Name:  S15_NS1_RNA-bd

1 Child Features

DB identifier Type Name
IPR000738 Domain WHEP-TRS domain

0 Contains

2 Cross Referencess

Identifier
SSF47060
G3DSA:1.10.287.10

3 Found Ins

DB identifier Type Name
IPR005290 Family Ribosomal protein S15, bacterial-type
IPR000589 Family Ribosomal protein S15
IPR000256 Family Influenza non-structural protein (NS1)

0 GO Annotation

0 Parent Features

1185 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
444084 D8S6C0 PAC:15413769 Selaginella moellendorffii 322  
268427 D8SD08 PAC:15414222 Selaginella moellendorffii 676  
39422 D8S0X8 PAC:15417962 Selaginella moellendorffii 69  
92995 D8RG18 PAC:15422242 Selaginella moellendorffii 563  
418417 D8S5M5 PAC:15406633 Selaginella moellendorffii 531  
440805 D8REI3 PAC:15407822 Selaginella moellendorffii 151  
evm.model.supercontig_29.94 PAC:16416307 Carica papaya 151  
evm.model.supercontig_3.282 PAC:16416571 Carica papaya 151  
evm.model.supercontig_10.123 PAC:16404475 Carica papaya 446  
evm.model.supercontig_182.1 PAC:16411559 Carica papaya 241  
evm.model.supercontig_27.45 PAC:16415665 Carica papaya 209  
evm.model.supercontig_78.58 PAC:16426236 Carica papaya 572  
29851.m002410 B9RZ89 PAC:16811437 Ricinus communis 211  
29912.m005417 B9RKD1 PAC:16813294 Ricinus communis 364  
29929.m004635 B9RMD0 PAC:16813874 Ricinus communis 186  
30128.m008560 B9RG03 PAC:16818150 Ricinus communis 686  
30147.m014187 B9R9P3 PAC:16820199 Ricinus communis 112  
27446.m000473 B9SWS4 PAC:16798333 Ricinus communis 461  
30174.m008862 B9RDA6 PAC:16822507 Ricinus communis 151  
Cucsa.362740.1 A0A0A0KEP4 PAC:16980974 Cucumis sativus 151  
Cucsa.178850.1 PAC:16967167 Cucumis sativus 729  
Cucsa.096170.1 A0A0A0KVK2 PAC:16957994 Cucumis sativus 449  
Cucsa.289040.1 A0A0A0LYN5 PAC:16975160 Cucumis sativus 572  
Cucsa.302270.1 A0A0A0KMS8 PAC:16975734 Cucumis sativus 151  
Cucsa.320490.1 A0A0A0L5N6 PAC:16977356 Cucumis sativus 151  
Cucsa.328640.1 PAC:16978183 Cucumis sativus 102  
GSVIVT01026722001 PAC:17834334 Vitis vinifera 141  
GSVIVT01026738001 D7U5R2 PAC:17834341 Vitis vinifera 77  
GSVIVT01027637001 A5B3K9 PAC:17834981 Vitis vinifera 151  
GSVIVT01018537001 D7T238 PAC:17828452 Vitis vinifera 151  

2 Publications

First Author Title Year Journal Volume Pages PubMed ID
            11123902
            10742169