Gene : Araha.60579s0002 A. halleri v1.1
Defline:  (1 of 8) 6.1.1.14 - Glycine--tRNA ligase / Glycyl-tRNA synthetase Genomic Order:  2
Name:  ? Araha.60579s0002 Secondary Identifier:  ? PAC:28846806
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri TRNA-CHARGING-PWY Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.60579s0002 0.5kb upstream 0.5kb upstream 2444 true Scaffold60579: 1482-3925 Arabidopsis halleri
Araha.60579s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold60579: 3426-3925 Arabidopsis halleri
Araha.60579s0002 0.5kb downstream 0.5kb downstream 2444 true Scaffold60579: 982-3425 Arabidopsis halleri
Araha.60579s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold60579: 982-1481 Arabidopsis halleri
Araha.60579s0002 1.0kb upstream 1.0kb upstream 2944 true Scaffold60579: 1482-4425 Arabidopsis halleri
Araha.60579s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold60579: 3426-4425 Arabidopsis halleri
Araha.60579s0002 1.0kb downstream 1.0kb downstream 2944 true Scaffold60579: 482-3425 Arabidopsis halleri
Araha.60579s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold60579: 482-1481 Arabidopsis halleri
Araha.60579s0002 2.0kb upstream 2.0kb upstream 2966 true Scaffold60579: 1482-4447 Arabidopsis halleri
Araha.60579s0002 2.0kb upstream 2.0kb upstream 1022 false Scaffold60579: 3426-4447 Arabidopsis halleri
Araha.60579s0002 2.0kb downstream 2.0kb downstream 3425 true Scaffold60579: 1-3425 Arabidopsis halleri
Araha.60579s0002 2.0kb downstream 2.0kb downstream 1481 false Scaffold60579: 1-1481 Arabidopsis halleri
Araha.60579s0002 5.0kb upstream 5.0kb upstream 2966 true Scaffold60579: 1482-4447 Arabidopsis halleri
Araha.60579s0002 5.0kb upstream 5.0kb upstream 1022 false Scaffold60579: 3426-4447 Arabidopsis halleri
Araha.60579s0002 5.0kb downstream 5.0kb downstream 3425 true Scaffold60579: 1-3425 Arabidopsis halleri
Araha.60579s0002 5.0kb downstream 5.0kb downstream 1481 false Scaffold60579: 1-1481 Arabidopsis halleri
Araha.60579s0002 10.0kb upstream 10.0kb upstream 2966 true Scaffold60579: 1482-4447 Arabidopsis halleri
Araha.60579s0002 10.0kb upstream 10.0kb upstream 1022 false Scaffold60579: 3426-4447 Arabidopsis halleri
Araha.60579s0002 10.0kb downstream 10.0kb downstream 3425 true Scaffold60579: 1-3425 Arabidopsis halleri
Araha.60579s0002 10.0kb downstream 10.0kb downstream 1481 false Scaffold60579: 1-1481 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122328196 5261 Brassicaceae View MSA
123769569 5264 Brassicales-Malvales View MSA
124268127 5266 SBM View MSA
124254791 5268 Malvidae View MSA
123952989 5270 Rosid View MSA
123751424 5271 Pentapetalae View MSA
122793864 5272 Eudicot View MSA
122047180 5273 Angiosperm View MSA
121348773 5274 Embryophyte View MSA
123423981 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain