Gene : Araha.48336s0002 A. halleri v1.1

Defline:  (1 of 5) PTHR27001:SF115 - PTI1-LIKE TYROSINE-PROTEIN KINASE 1-RELATED Genomic Order:  2
Name:  ? Araha.48336s0002 Secondary Identifier:  ? PAC:28838414

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.48336s0002 0.5kb upstream 0.5kb upstream 3704 true Scaffold48336: 3466-7169 Arabidopsis halleri
Araha.48336s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold48336: 6670-7169 Arabidopsis halleri
Araha.48336s0002 0.5kb downstream 0.5kb downstream 3704 true Scaffold48336: 2966-6669 Arabidopsis halleri
Araha.48336s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold48336: 2966-3465 Arabidopsis halleri
Araha.48336s0002 1.0kb upstream 1.0kb upstream 4204 true Scaffold48336: 3466-7669 Arabidopsis halleri
Araha.48336s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold48336: 6670-7669 Arabidopsis halleri
Araha.48336s0002 1.0kb downstream 1.0kb downstream 4204 true Scaffold48336: 2466-6669 Arabidopsis halleri
Araha.48336s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold48336: 2466-3465 Arabidopsis halleri
Araha.48336s0002 2.0kb upstream 2.0kb upstream 5204 true Scaffold48336: 3466-8669 Arabidopsis halleri
Araha.48336s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold48336: 6670-8669 Arabidopsis halleri
Araha.48336s0002 2.0kb downstream 2.0kb downstream 5204 true Scaffold48336: 1466-6669 Arabidopsis halleri
Araha.48336s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold48336: 1466-3465 Arabidopsis halleri
Araha.48336s0002 5.0kb upstream 5.0kb upstream 8204 true Scaffold48336: 3466-11669 Arabidopsis halleri
Araha.48336s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold48336: 6670-11669 Arabidopsis halleri
Araha.48336s0002 5.0kb downstream 5.0kb downstream 6669 true Scaffold48336: 1-6669 Arabidopsis halleri
Araha.48336s0002 5.0kb downstream 5.0kb downstream 3465 false Scaffold48336: 1-3465 Arabidopsis halleri
Araha.48336s0002 10.0kb upstream 10.0kb upstream 13204 true Scaffold48336: 3466-16669 Arabidopsis halleri
Araha.48336s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold48336: 6670-16669 Arabidopsis halleri
Araha.48336s0002 10.0kb downstream 10.0kb downstream 6669 true Scaffold48336: 1-6669 Arabidopsis halleri
Araha.48336s0002 10.0kb downstream 10.0kb downstream 3465 false Scaffold48336: 1-3465 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377877 5261 Brassicaceae View MSA
123801660 5264 Brassicales-Malvales View MSA
124298937 5266 SBM View MSA
124150470 5268 Malvidae View MSA
123876076 5270 Rosid View MSA
123647280 5271 Pentapetalae View MSA
122681269 5272 Eudicot View MSA
122044012 5273 Angiosperm View MSA
121347180 5274 Embryophyte View MSA
123380505 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain