Gene : Araha.43982s0002 A. halleri v1.1
Defline:  (1 of 1) 2.3.1.91 - Sinapoylglucose--choline O-sinapoyltransferase / Sinapine synthase Genomic Order:  2
Name:  ? Araha.43982s0002 Secondary Identifier:  ? PAC:28862350
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-3301 Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.43982s0002 0.5kb upstream 0.5kb upstream 3366 true Scaffold43982: 2704-6069 Arabidopsis halleri
Araha.43982s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold43982: 2704-3203 Arabidopsis halleri
Araha.43982s0002 0.5kb downstream 0.5kb downstream 3366 true Scaffold43982: 3204-6569 Arabidopsis halleri
Araha.43982s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold43982: 6070-6569 Arabidopsis halleri
Araha.43982s0002 1.0kb upstream 1.0kb upstream 3866 true Scaffold43982: 2204-6069 Arabidopsis halleri
Araha.43982s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold43982: 2204-3203 Arabidopsis halleri
Araha.43982s0002 1.0kb downstream 1.0kb downstream 3866 true Scaffold43982: 3204-7069 Arabidopsis halleri
Araha.43982s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold43982: 6070-7069 Arabidopsis halleri
Araha.43982s0002 2.0kb upstream 2.0kb upstream 4866 true Scaffold43982: 1204-6069 Arabidopsis halleri
Araha.43982s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold43982: 1204-3203 Arabidopsis halleri
Araha.43982s0002 2.0kb downstream 2.0kb downstream 4866 true Scaffold43982: 3204-8069 Arabidopsis halleri
Araha.43982s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold43982: 6070-8069 Arabidopsis halleri
Araha.43982s0002 5.0kb upstream 5.0kb upstream 6069 true Scaffold43982: 1-6069 Arabidopsis halleri
Araha.43982s0002 5.0kb upstream 5.0kb upstream 3203 false Scaffold43982: 1-3203 Arabidopsis halleri
Araha.43982s0002 5.0kb downstream 5.0kb downstream 7866 true Scaffold43982: 3204-11069 Arabidopsis halleri
Araha.43982s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold43982: 6070-11069 Arabidopsis halleri
Araha.43982s0002 10.0kb upstream 10.0kb upstream 6069 true Scaffold43982: 1-6069 Arabidopsis halleri
Araha.43982s0002 10.0kb upstream 10.0kb upstream 3203 false Scaffold43982: 1-3203 Arabidopsis halleri
Araha.43982s0002 10.0kb downstream 10.0kb downstream 12866 true Scaffold43982: 3204-16069 Arabidopsis halleri
Araha.43982s0002 10.0kb downstream 10.0kb downstream 10000 false Scaffold43982: 6070-16069 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361550 5261 Brassicaceae View MSA
123841552 5264 Brassicales-Malvales View MSA
124347801 5266 SBM View MSA
124254219 5268 Malvidae View MSA
124073941 5270 Rosid View MSA
123747460 5271 Pentapetalae View MSA
122796815 5272 Eudicot View MSA
122050629 5273 Angiosperm View MSA
121312037 5274 Embryophyte View MSA
123349249 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain