Gene : Araha.3842s0009 A. halleri v1.1
Defline:  (1 of 4) 1.2.4.4 - 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) / Dehydrogenase, branched chain alpha-keto acid Genomic Order:  9
Name:  ? Araha.3842s0009 Secondary Identifier:  ? PAC:28848699
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-5046 Arabidopsis halleri pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.3842s0009 0.5kb upstream 0.5kb upstream 2760 true Scaffold3842: 30584-33343 Arabidopsis halleri
Araha.3842s0009 0.5kb upstream 0.5kb upstream 500 false Scaffold3842: 30584-31083 Arabidopsis halleri
Araha.3842s0009 0.5kb downstream 0.5kb downstream 2760 true Scaffold3842: 31084-33843 Arabidopsis halleri
Araha.3842s0009 0.5kb downstream 0.5kb downstream 500 false Scaffold3842: 33344-33843 Arabidopsis halleri
Araha.3842s0009 1.0kb upstream 1.0kb upstream 3260 true Scaffold3842: 30084-33343 Arabidopsis halleri
Araha.3842s0009 1.0kb upstream 1.0kb upstream 1000 false Scaffold3842: 30084-31083 Arabidopsis halleri
Araha.3842s0009 1.0kb downstream 1.0kb downstream 3260 true Scaffold3842: 31084-34343 Arabidopsis halleri
Araha.3842s0009 1.0kb downstream 1.0kb downstream 1000 false Scaffold3842: 33344-34343 Arabidopsis halleri
Araha.3842s0009 2.0kb upstream 2.0kb upstream 4260 true Scaffold3842: 29084-33343 Arabidopsis halleri
Araha.3842s0009 2.0kb upstream 2.0kb upstream 2000 false Scaffold3842: 29084-31083 Arabidopsis halleri
Araha.3842s0009 2.0kb downstream 2.0kb downstream 4260 true Scaffold3842: 31084-35343 Arabidopsis halleri
Araha.3842s0009 2.0kb downstream 2.0kb downstream 2000 false Scaffold3842: 33344-35343 Arabidopsis halleri
Araha.3842s0009 5.0kb upstream 5.0kb upstream 7260 true Scaffold3842: 26084-33343 Arabidopsis halleri
Araha.3842s0009 5.0kb upstream 5.0kb upstream 5000 false Scaffold3842: 26084-31083 Arabidopsis halleri
Araha.3842s0009 5.0kb downstream 5.0kb downstream 6266 true Scaffold3842: 31084-37349 Arabidopsis halleri
Araha.3842s0009 5.0kb downstream 5.0kb downstream 4006 false Scaffold3842: 33344-37349 Arabidopsis halleri
Araha.3842s0009 10.0kb upstream 10.0kb upstream 12260 true Scaffold3842: 21084-33343 Arabidopsis halleri
Araha.3842s0009 10.0kb upstream 10.0kb upstream 10000 false Scaffold3842: 21084-31083 Arabidopsis halleri
Araha.3842s0009 10.0kb downstream 10.0kb downstream 6266 true Scaffold3842: 31084-37349 Arabidopsis halleri
Araha.3842s0009 10.0kb downstream 10.0kb downstream 4006 false Scaffold3842: 33344-37349 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377784 5261 Brassicaceae View MSA
123830123 5264 Brassicales-Malvales View MSA
124341245 5266 SBM View MSA
124243640 5268 Malvidae View MSA
124067270 5270 Rosid View MSA
123743874 5271 Pentapetalae View MSA
122787684 5272 Eudicot View MSA
122046166 5273 Angiosperm View MSA
121344271 5274 Embryophyte View MSA
123424966 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain