Gene : Araha.2594s0006 A. halleri v1.1

Defline:  (1 of 1) PTHR13270 - PROTEIN C20ORF116-RELATED Genomic Order:  6
Name:  ? Araha.2594s0006 Secondary Identifier:  ? PAC:28853652

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.2594s0006 0.5kb upstream 0.5kb upstream 2999 true Scaffold2594: 17878-20876 Arabidopsis halleri
Araha.2594s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold2594: 20377-20876 Arabidopsis halleri
Araha.2594s0006 0.5kb downstream 0.5kb downstream 2999 true Scaffold2594: 17378-20376 Arabidopsis halleri
Araha.2594s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold2594: 17378-17877 Arabidopsis halleri
Araha.2594s0006 1.0kb upstream 1.0kb upstream 3499 true Scaffold2594: 17878-21376 Arabidopsis halleri
Araha.2594s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold2594: 20377-21376 Arabidopsis halleri
Araha.2594s0006 1.0kb downstream 1.0kb downstream 3499 true Scaffold2594: 16878-20376 Arabidopsis halleri
Araha.2594s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold2594: 16878-17877 Arabidopsis halleri
Araha.2594s0006 2.0kb upstream 2.0kb upstream 4499 true Scaffold2594: 17878-22376 Arabidopsis halleri
Araha.2594s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold2594: 20377-22376 Arabidopsis halleri
Araha.2594s0006 2.0kb downstream 2.0kb downstream 4499 true Scaffold2594: 15878-20376 Arabidopsis halleri
Araha.2594s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold2594: 15878-17877 Arabidopsis halleri
Araha.2594s0006 5.0kb upstream 5.0kb upstream 7499 true Scaffold2594: 17878-25376 Arabidopsis halleri
Araha.2594s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold2594: 20377-25376 Arabidopsis halleri
Araha.2594s0006 5.0kb downstream 5.0kb downstream 7499 true Scaffold2594: 12878-20376 Arabidopsis halleri
Araha.2594s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold2594: 12878-17877 Arabidopsis halleri
Araha.2594s0006 10.0kb upstream 10.0kb upstream 12499 true Scaffold2594: 17878-30376 Arabidopsis halleri
Araha.2594s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold2594: 20377-30376 Arabidopsis halleri
Araha.2594s0006 10.0kb downstream 10.0kb downstream 12499 true Scaffold2594: 7878-20376 Arabidopsis halleri
Araha.2594s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold2594: 7878-17877 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370851 5261 Brassicaceae View MSA
123841557 5264 Brassicales-Malvales View MSA
124341522 5266 SBM View MSA
124251142 5268 Malvidae View MSA
124064342 5270 Rosid View MSA
123740748 5271 Pentapetalae View MSA
122787568 5272 Eudicot View MSA
122042845 5273 Angiosperm View MSA
121345530 5274 Embryophyte View MSA
123425622 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain