Gene : Araha.1786s0004 A. halleri v1.1
Defline:  (1 of 1) PTHR11879//PTHR11879:SF18 - ASPARTATE AMINOTRANSFERASE Genomic Order:  4
Name:  ? Araha.1786s0004 Secondary Identifier:  ? PAC:28853546
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri ASPARTATE-DEG1-PWY Arabidopsis halleri pathologic  
Ahalleri ASPARTATESYN-PWY Arabidopsis halleri pathologic  
Ahalleri PWY-3001 Arabidopsis halleri pathologic  
Ahalleri PWY-7115 Arabidopsis halleri pathologic  
Ahalleri PWY-7117 Arabidopsis halleri pathologic  
Ahalleri THRESYN-PWY Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.1786s0004 0.5kb upstream 0.5kb upstream 3534 true Scaffold1786: 10690-14223 Arabidopsis halleri
Araha.1786s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold1786: 13724-14223 Arabidopsis halleri
Araha.1786s0004 0.5kb downstream 0.5kb downstream 3534 true Scaffold1786: 10190-13723 Arabidopsis halleri
Araha.1786s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold1786: 10190-10689 Arabidopsis halleri
Araha.1786s0004 1.0kb upstream 1.0kb upstream 4034 true Scaffold1786: 10690-14723 Arabidopsis halleri
Araha.1786s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold1786: 13724-14723 Arabidopsis halleri
Araha.1786s0004 1.0kb downstream 1.0kb downstream 4034 true Scaffold1786: 9690-13723 Arabidopsis halleri
Araha.1786s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold1786: 9690-10689 Arabidopsis halleri
Araha.1786s0004 2.0kb upstream 2.0kb upstream 5034 true Scaffold1786: 10690-15723 Arabidopsis halleri
Araha.1786s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold1786: 13724-15723 Arabidopsis halleri
Araha.1786s0004 2.0kb downstream 2.0kb downstream 5034 true Scaffold1786: 8690-13723 Arabidopsis halleri
Araha.1786s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold1786: 8690-10689 Arabidopsis halleri
Araha.1786s0004 5.0kb upstream 5.0kb upstream 8034 true Scaffold1786: 10690-18723 Arabidopsis halleri
Araha.1786s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold1786: 13724-18723 Arabidopsis halleri
Araha.1786s0004 5.0kb downstream 5.0kb downstream 8034 true Scaffold1786: 5690-13723 Arabidopsis halleri
Araha.1786s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold1786: 5690-10689 Arabidopsis halleri
Araha.1786s0004 10.0kb upstream 10.0kb upstream 13034 true Scaffold1786: 10690-23723 Arabidopsis halleri
Araha.1786s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold1786: 13724-23723 Arabidopsis halleri
Araha.1786s0004 10.0kb downstream 10.0kb downstream 13034 true Scaffold1786: 690-13723 Arabidopsis halleri
Araha.1786s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold1786: 690-10689 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368520 5261 Brassicaceae View MSA
123839385 5264 Brassicales-Malvales View MSA
124344803 5266 SBM View MSA
124241659 5268 Malvidae View MSA
124063482 5270 Rosid View MSA
123737145 5271 Pentapetalae View MSA
122793092 5272 Eudicot View MSA
122046072 5273 Angiosperm View MSA
121344214 5274 Embryophyte View MSA
123424622 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain