Gene : Carub.0003s3078 C. rubella v1.1
Defline:  (1 of 2) K18752 - transportin-1 (TNPO1) Genomic Order:  3078
Name:  ? Carub.0003s3078 Secondary Identifier:  ? PAC:39240576
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s3078 0.5kb upstream 0.5kb upstream 7086 true scaffold_3: 13061696-13068781 Capsella rubella
Carub.0003s3078 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 13061696-13062195 Capsella rubella
Carub.0003s3078 0.5kb downstream 0.5kb downstream 7086 true scaffold_3: 13062196-13069281 Capsella rubella
Carub.0003s3078 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 13068782-13069281 Capsella rubella
Carub.0003s3078 1.0kb upstream 1.0kb upstream 7586 true scaffold_3: 13061196-13068781 Capsella rubella
Carub.0003s3078 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 13061196-13062195 Capsella rubella
Carub.0003s3078 1.0kb downstream 1.0kb downstream 7586 true scaffold_3: 13062196-13069781 Capsella rubella
Carub.0003s3078 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 13068782-13069781 Capsella rubella
Carub.0003s3078 2.0kb upstream 2.0kb upstream 8586 true scaffold_3: 13060196-13068781 Capsella rubella
Carub.0003s3078 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 13060196-13062195 Capsella rubella
Carub.0003s3078 2.0kb downstream 2.0kb downstream 8586 true scaffold_3: 13062196-13070781 Capsella rubella
Carub.0003s3078 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 13068782-13070781 Capsella rubella
Carub.0003s3078 5.0kb upstream 5.0kb upstream 11586 true scaffold_3: 13057196-13068781 Capsella rubella
Carub.0003s3078 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 13057196-13062195 Capsella rubella
Carub.0003s3078 5.0kb downstream 5.0kb downstream 11586 true scaffold_3: 13062196-13073781 Capsella rubella
Carub.0003s3078 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 13068782-13073781 Capsella rubella
Carub.0003s3078 10.0kb upstream 10.0kb upstream 16586 true scaffold_3: 13052196-13068781 Capsella rubella
Carub.0003s3078 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 13052196-13062195 Capsella rubella
Carub.0003s3078 10.0kb downstream 10.0kb downstream 16586 true scaffold_3: 13062196-13078781 Capsella rubella
Carub.0003s3078 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 13068782-13078781 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026329 5273 Angiosperm View MSA
122376283 5261 Brassicaceae View MSA
123829737 5264 Brassicales-Malvales View MSA
124344998 5266 SBM View MSA
124237948 5268 Malvidae View MSA
124064274 5270 Rosid View MSA
123739927 5271 Pentapetalae View MSA
122787120 5272 Eudicot View MSA
121344720 5274 Embryophyte View MSA
123426345 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain