Gene : Carub.0006s1328 C. rubella v1.1
Defline:  (1 of 4) PTHR31683//PTHR31683:SF7 - FAMILY NOT NAMED // PECTATE LYASE 19-RELATED Genomic Order:  1328
Name:  ? Carub.0006s1328 Secondary Identifier:  ? PAC:39248737
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s1328 0.5kb upstream 0.5kb upstream 2600 true scaffold_6: 4940217-4942816 Capsella rubella
Carub.0006s1328 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 4940217-4940716 Capsella rubella
Carub.0006s1328 0.5kb downstream 0.5kb downstream 2600 true scaffold_6: 4940717-4943316 Capsella rubella
Carub.0006s1328 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 4942817-4943316 Capsella rubella
Carub.0006s1328 1.0kb upstream 1.0kb upstream 3100 true scaffold_6: 4939717-4942816 Capsella rubella
Carub.0006s1328 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 4939717-4940716 Capsella rubella
Carub.0006s1328 1.0kb downstream 1.0kb downstream 3100 true scaffold_6: 4940717-4943816 Capsella rubella
Carub.0006s1328 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 4942817-4943816 Capsella rubella
Carub.0006s1328 2.0kb upstream 2.0kb upstream 4100 true scaffold_6: 4938717-4942816 Capsella rubella
Carub.0006s1328 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 4938717-4940716 Capsella rubella
Carub.0006s1328 2.0kb downstream 2.0kb downstream 4100 true scaffold_6: 4940717-4944816 Capsella rubella
Carub.0006s1328 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 4942817-4944816 Capsella rubella
Carub.0006s1328 5.0kb upstream 5.0kb upstream 7100 true scaffold_6: 4935717-4942816 Capsella rubella
Carub.0006s1328 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 4935717-4940716 Capsella rubella
Carub.0006s1328 5.0kb downstream 5.0kb downstream 7100 true scaffold_6: 4940717-4947816 Capsella rubella
Carub.0006s1328 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 4942817-4947816 Capsella rubella
Carub.0006s1328 10.0kb upstream 10.0kb upstream 12100 true scaffold_6: 4930717-4942816 Capsella rubella
Carub.0006s1328 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 4930717-4940716 Capsella rubella
Carub.0006s1328 10.0kb downstream 10.0kb downstream 12100 true scaffold_6: 4940717-4952816 Capsella rubella
Carub.0006s1328 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 4942817-4952816 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379716 5261 Brassicaceae View MSA
123838206 5264 Brassicales-Malvales View MSA
124350404 5266 SBM View MSA
124247401 5268 Malvidae View MSA
124069296 5270 Rosid View MSA
123749712 5271 Pentapetalae View MSA
122796488 5272 Eudicot View MSA
122048773 5273 Angiosperm View MSA
121311104 5274 Embryophyte View MSA
123348449 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain