Gene : Carub.0002s1969 C. rubella v1.1
Defline:  (1 of 21) PTHR11017//PTHR11017:SF169 - LEUCINE-RICH REPEAT-CONTAINING PROTEIN // DISEASE RESISTANCE PROTEIN-RELATED Genomic Order:  1969
Name:  ? Carub.0002s1969 Secondary Identifier:  ? PAC:39245937
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s1969 0.5kb upstream 0.5kb upstream 2024 true scaffold_2: 11004511-11006534 Capsella rubella
Carub.0002s1969 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 11004511-11005010 Capsella rubella
Carub.0002s1969 0.5kb downstream 0.5kb downstream 2024 true scaffold_2: 11005011-11007034 Capsella rubella
Carub.0002s1969 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 11006535-11007034 Capsella rubella
Carub.0002s1969 1.0kb upstream 1.0kb upstream 2524 true scaffold_2: 11004011-11006534 Capsella rubella
Carub.0002s1969 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 11004011-11005010 Capsella rubella
Carub.0002s1969 1.0kb downstream 1.0kb downstream 2524 true scaffold_2: 11005011-11007534 Capsella rubella
Carub.0002s1969 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 11006535-11007534 Capsella rubella
Carub.0002s1969 2.0kb upstream 2.0kb upstream 3524 true scaffold_2: 11003011-11006534 Capsella rubella
Carub.0002s1969 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 11003011-11005010 Capsella rubella
Carub.0002s1969 2.0kb downstream 2.0kb downstream 3524 true scaffold_2: 11005011-11008534 Capsella rubella
Carub.0002s1969 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 11006535-11008534 Capsella rubella
Carub.0002s1969 5.0kb upstream 5.0kb upstream 6524 true scaffold_2: 11000011-11006534 Capsella rubella
Carub.0002s1969 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 11000011-11005010 Capsella rubella
Carub.0002s1969 5.0kb downstream 5.0kb downstream 6524 true scaffold_2: 11005011-11011534 Capsella rubella
Carub.0002s1969 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 11006535-11011534 Capsella rubella
Carub.0002s1969 10.0kb upstream 10.0kb upstream 11524 true scaffold_2: 10995011-11006534 Capsella rubella
Carub.0002s1969 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 10995011-11005010 Capsella rubella
Carub.0002s1969 10.0kb downstream 10.0kb downstream 11524 true scaffold_2: 11005011-11016534 Capsella rubella
Carub.0002s1969 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 11006535-11016534 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361445 5261 Brassicaceae View MSA
123798174 5264 Brassicales-Malvales View MSA
124295846 5266 SBM View MSA
124254426 5268 Malvidae View MSA
124074947 5270 Rosid View MSA
123753572 5271 Pentapetalae View MSA
122797897 5272 Eudicot View MSA
122051706 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain