Gene : Carub.0002s2765 C. rubella v1.1

Defline:  (1 of 1) PTHR10744//PTHR10744:SF7 - 40S RIBOSOMAL PROTEIN S11 FAMILY MEMBER // 30S RIBOSOMAL PROTEIN S17, CHLOROPLASTIC Genomic Order:  2765
Name:  ? Carub.0002s2765 Secondary Identifier:  ? PAC:39243896

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s2765 0.5kb upstream 0.5kb upstream 1100 true scaffold_2: 14059556-14060655 Capsella rubella
Carub.0002s2765 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 14059556-14060055 Capsella rubella
Carub.0002s2765 0.5kb downstream 0.5kb downstream 1100 true scaffold_2: 14060056-14061155 Capsella rubella
Carub.0002s2765 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 14060656-14061155 Capsella rubella
Carub.0002s2765 1.0kb upstream 1.0kb upstream 1600 true scaffold_2: 14059056-14060655 Capsella rubella
Carub.0002s2765 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 14059056-14060055 Capsella rubella
Carub.0002s2765 1.0kb downstream 1.0kb downstream 1600 true scaffold_2: 14060056-14061655 Capsella rubella
Carub.0002s2765 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 14060656-14061655 Capsella rubella
Carub.0002s2765 2.0kb upstream 2.0kb upstream 2600 true scaffold_2: 14058056-14060655 Capsella rubella
Carub.0002s2765 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 14058056-14060055 Capsella rubella
Carub.0002s2765 2.0kb downstream 2.0kb downstream 2600 true scaffold_2: 14060056-14062655 Capsella rubella
Carub.0002s2765 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 14060656-14062655 Capsella rubella
Carub.0002s2765 5.0kb upstream 5.0kb upstream 5600 true scaffold_2: 14055056-14060655 Capsella rubella
Carub.0002s2765 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 14055056-14060055 Capsella rubella
Carub.0002s2765 5.0kb downstream 5.0kb downstream 5600 true scaffold_2: 14060056-14065655 Capsella rubella
Carub.0002s2765 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 14060656-14065655 Capsella rubella
Carub.0002s2765 10.0kb upstream 10.0kb upstream 10600 true scaffold_2: 14050056-14060655 Capsella rubella
Carub.0002s2765 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 14050056-14060055 Capsella rubella
Carub.0002s2765 10.0kb downstream 10.0kb downstream 10600 true scaffold_2: 14060056-14070655 Capsella rubella
Carub.0002s2765 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 14060656-14070655 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366713 5261 Brassicaceae View MSA
123832399 5264 Brassicales-Malvales View MSA
124346149 5266 SBM View MSA
124253303 5268 Malvidae View MSA
124063542 5270 Rosid View MSA
123744369 5271 Pentapetalae View MSA
122786157 5272 Eudicot View MSA
122045320 5273 Angiosperm View MSA
121347348 5274 Embryophyte View MSA
123424165 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain