Gene : Carub.0002s2722 C. rubella v1.1
Defline:  (1 of 1) PTHR23074//PTHR23074:SF19 - AAA ATPASE // KATANIN P60 ATPASE-CONTAINING SUBUNIT A1 Genomic Order:  2722
Name:  ? Carub.0002s2722 Secondary Identifier:  ? PAC:39244178
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s2722 0.5kb upstream 0.5kb upstream 3478 true scaffold_2: 13915516-13918993 Capsella rubella
Carub.0002s2722 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 13915516-13916015 Capsella rubella
Carub.0002s2722 0.5kb downstream 0.5kb downstream 3478 true scaffold_2: 13916016-13919493 Capsella rubella
Carub.0002s2722 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 13918994-13919493 Capsella rubella
Carub.0002s2722 1.0kb upstream 1.0kb upstream 3978 true scaffold_2: 13915016-13918993 Capsella rubella
Carub.0002s2722 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 13915016-13916015 Capsella rubella
Carub.0002s2722 1.0kb downstream 1.0kb downstream 3978 true scaffold_2: 13916016-13919993 Capsella rubella
Carub.0002s2722 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 13918994-13919993 Capsella rubella
Carub.0002s2722 2.0kb upstream 2.0kb upstream 4978 true scaffold_2: 13914016-13918993 Capsella rubella
Carub.0002s2722 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 13914016-13916015 Capsella rubella
Carub.0002s2722 2.0kb downstream 2.0kb downstream 4978 true scaffold_2: 13916016-13920993 Capsella rubella
Carub.0002s2722 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 13918994-13920993 Capsella rubella
Carub.0002s2722 5.0kb upstream 5.0kb upstream 7978 true scaffold_2: 13911016-13918993 Capsella rubella
Carub.0002s2722 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 13911016-13916015 Capsella rubella
Carub.0002s2722 5.0kb downstream 5.0kb downstream 7978 true scaffold_2: 13916016-13923993 Capsella rubella
Carub.0002s2722 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 13918994-13923993 Capsella rubella
Carub.0002s2722 10.0kb upstream 10.0kb upstream 12978 true scaffold_2: 13906016-13918993 Capsella rubella
Carub.0002s2722 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 13906016-13916015 Capsella rubella
Carub.0002s2722 10.0kb downstream 10.0kb downstream 12978 true scaffold_2: 13916016-13928993 Capsella rubella
Carub.0002s2722 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 13918994-13928993 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369461 5261 Brassicaceae View MSA
123834052 5264 Brassicales-Malvales View MSA
124337108 5266 SBM View MSA
124237211 5268 Malvidae View MSA
124065389 5270 Rosid View MSA
123736381 5271 Pentapetalae View MSA
122791135 5272 Eudicot View MSA
122044987 5273 Angiosperm View MSA
121345525 5274 Embryophyte View MSA
123426944 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain