Gene : Carub.0005s2466 C. rubella v1.1
Defline:  (1 of 2) PTHR12565//PTHR12565:SF112 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // TRANSCRIPTION FACTOR BHLH48-RELATED Genomic Order:  2466
Name:  ? Carub.0005s2466 Secondary Identifier:  ? PAC:39224986
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s2466 0.5kb upstream 0.5kb upstream 4480 true scaffold_5: 11688878-11693357 Capsella rubella
Carub.0005s2466 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 11692858-11693357 Capsella rubella
Carub.0005s2466 0.5kb downstream 0.5kb downstream 4480 true scaffold_5: 11688378-11692857 Capsella rubella
Carub.0005s2466 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 11688378-11688877 Capsella rubella
Carub.0005s2466 1.0kb upstream 1.0kb upstream 4980 true scaffold_5: 11688878-11693857 Capsella rubella
Carub.0005s2466 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 11692858-11693857 Capsella rubella
Carub.0005s2466 1.0kb downstream 1.0kb downstream 4980 true scaffold_5: 11687878-11692857 Capsella rubella
Carub.0005s2466 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 11687878-11688877 Capsella rubella
Carub.0005s2466 2.0kb upstream 2.0kb upstream 5980 true scaffold_5: 11688878-11694857 Capsella rubella
Carub.0005s2466 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 11692858-11694857 Capsella rubella
Carub.0005s2466 2.0kb downstream 2.0kb downstream 5980 true scaffold_5: 11686878-11692857 Capsella rubella
Carub.0005s2466 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 11686878-11688877 Capsella rubella
Carub.0005s2466 5.0kb upstream 5.0kb upstream 8980 true scaffold_5: 11688878-11697857 Capsella rubella
Carub.0005s2466 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 11692858-11697857 Capsella rubella
Carub.0005s2466 5.0kb downstream 5.0kb downstream 8980 true scaffold_5: 11683878-11692857 Capsella rubella
Carub.0005s2466 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 11683878-11688877 Capsella rubella
Carub.0005s2466 10.0kb upstream 10.0kb upstream 13980 true scaffold_5: 11688878-11702857 Capsella rubella
Carub.0005s2466 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 11692858-11702857 Capsella rubella
Carub.0005s2466 10.0kb downstream 10.0kb downstream 13980 true scaffold_5: 11678878-11692857 Capsella rubella
Carub.0005s2466 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 11678878-11688877 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379284 5261 Brassicaceae View MSA
123839829 5264 Brassicales-Malvales View MSA
124338408 5266 SBM View MSA
124240719 5268 Malvidae View MSA
124063738 5270 Rosid View MSA
123737117 5271 Pentapetalae View MSA
122769887 5272 Eudicot View MSA
122044005 5273 Angiosperm View MSA
121310224 5274 Embryophyte View MSA
123347772 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain