Gene : Carub.0005s2425 C. rubella v1.1
Defline:  (1 of 2) PTHR11977:SF46 - VILLIN-2-RELATED Genomic Order:  2425
Name:  ? Carub.0005s2425 Secondary Identifier:  ? PAC:39224809
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s2425 0.5kb upstream 0.5kb upstream 8929 true scaffold_5: 11522887-11531815 Capsella rubella
Carub.0005s2425 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 11531316-11531815 Capsella rubella
Carub.0005s2425 0.5kb downstream 0.5kb downstream 8929 true scaffold_5: 11522387-11531315 Capsella rubella
Carub.0005s2425 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 11522387-11522886 Capsella rubella
Carub.0005s2425 1.0kb upstream 1.0kb upstream 9429 true scaffold_5: 11522887-11532315 Capsella rubella
Carub.0005s2425 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 11531316-11532315 Capsella rubella
Carub.0005s2425 1.0kb downstream 1.0kb downstream 9429 true scaffold_5: 11521887-11531315 Capsella rubella
Carub.0005s2425 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 11521887-11522886 Capsella rubella
Carub.0005s2425 2.0kb upstream 2.0kb upstream 10429 true scaffold_5: 11522887-11533315 Capsella rubella
Carub.0005s2425 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 11531316-11533315 Capsella rubella
Carub.0005s2425 2.0kb downstream 2.0kb downstream 10429 true scaffold_5: 11520887-11531315 Capsella rubella
Carub.0005s2425 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 11520887-11522886 Capsella rubella
Carub.0005s2425 5.0kb upstream 5.0kb upstream 13429 true scaffold_5: 11522887-11536315 Capsella rubella
Carub.0005s2425 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 11531316-11536315 Capsella rubella
Carub.0005s2425 5.0kb downstream 5.0kb downstream 13429 true scaffold_5: 11517887-11531315 Capsella rubella
Carub.0005s2425 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 11517887-11522886 Capsella rubella
Carub.0005s2425 10.0kb upstream 10.0kb upstream 18429 true scaffold_5: 11522887-11541315 Capsella rubella
Carub.0005s2425 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 11531316-11541315 Capsella rubella
Carub.0005s2425 10.0kb downstream 10.0kb downstream 18429 true scaffold_5: 11512887-11531315 Capsella rubella
Carub.0005s2425 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 11512887-11522886 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371204 5261 Brassicaceae View MSA
123835797 5264 Brassicales-Malvales View MSA
124336767 5266 SBM View MSA
124242323 5268 Malvidae View MSA
124073983 5270 Rosid View MSA
123746997 5271 Pentapetalae View MSA
122787653 5272 Eudicot View MSA
122045206 5273 Angiosperm View MSA
121349269 5274 Embryophyte View MSA
123428280 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain