Gene : Carub.0005s1304 C. rubella v1.1
Defline:  (1 of 9) PF01535//PF13041//PF13812//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) // DYW family of nucleic acid deaminases (DYW_deaminase) Genomic Order:  1304
Name:  ? Carub.0005s1304 Secondary Identifier:  ? PAC:39226023
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s1304 0.5kb upstream 0.5kb upstream 2992 true scaffold_5: 7367031-7370022 Capsella rubella
Carub.0005s1304 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 7369523-7370022 Capsella rubella
Carub.0005s1304 0.5kb downstream 0.5kb downstream 2992 true scaffold_5: 7366531-7369522 Capsella rubella
Carub.0005s1304 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 7366531-7367030 Capsella rubella
Carub.0005s1304 1.0kb upstream 1.0kb upstream 3492 true scaffold_5: 7367031-7370522 Capsella rubella
Carub.0005s1304 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 7369523-7370522 Capsella rubella
Carub.0005s1304 1.0kb downstream 1.0kb downstream 3492 true scaffold_5: 7366031-7369522 Capsella rubella
Carub.0005s1304 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 7366031-7367030 Capsella rubella
Carub.0005s1304 2.0kb upstream 2.0kb upstream 4492 true scaffold_5: 7367031-7371522 Capsella rubella
Carub.0005s1304 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 7369523-7371522 Capsella rubella
Carub.0005s1304 2.0kb downstream 2.0kb downstream 4492 true scaffold_5: 7365031-7369522 Capsella rubella
Carub.0005s1304 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 7365031-7367030 Capsella rubella
Carub.0005s1304 5.0kb upstream 5.0kb upstream 7492 true scaffold_5: 7367031-7374522 Capsella rubella
Carub.0005s1304 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 7369523-7374522 Capsella rubella
Carub.0005s1304 5.0kb downstream 5.0kb downstream 7492 true scaffold_5: 7362031-7369522 Capsella rubella
Carub.0005s1304 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 7362031-7367030 Capsella rubella
Carub.0005s1304 10.0kb upstream 10.0kb upstream 12492 true scaffold_5: 7367031-7379522 Capsella rubella
Carub.0005s1304 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 7369523-7379522 Capsella rubella
Carub.0005s1304 10.0kb downstream 10.0kb downstream 12492 true scaffold_5: 7357031-7369522 Capsella rubella
Carub.0005s1304 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 7357031-7367030 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027491 5273 Angiosperm View MSA
122363885 5261 Brassicaceae View MSA
123831367 5264 Brassicales-Malvales View MSA
124345335 5266 SBM View MSA
124239641 5268 Malvidae View MSA
124062033 5270 Rosid View MSA
123753025 5271 Pentapetalae View MSA
122794671 5272 Eudicot View MSA
121352423 5274 Embryophyte View MSA
123382766 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain