Gene : Carub.0004s2464 C. rubella v1.1
Defline:  (1 of 2) PTHR12565//PTHR12565:SF112 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // TRANSCRIPTION FACTOR BHLH48-RELATED Genomic Order:  2464
Name:  ? Carub.0004s2464 Secondary Identifier:  ? PAC:39236614
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s2464 0.5kb upstream 0.5kb upstream 4191 true scaffold_4: 12760783-12764973 Capsella rubella
Carub.0004s2464 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 12760783-12761282 Capsella rubella
Carub.0004s2464 0.5kb downstream 0.5kb downstream 4191 true scaffold_4: 12761283-12765473 Capsella rubella
Carub.0004s2464 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 12764974-12765473 Capsella rubella
Carub.0004s2464 1.0kb upstream 1.0kb upstream 4691 true scaffold_4: 12760283-12764973 Capsella rubella
Carub.0004s2464 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 12760283-12761282 Capsella rubella
Carub.0004s2464 1.0kb downstream 1.0kb downstream 4691 true scaffold_4: 12761283-12765973 Capsella rubella
Carub.0004s2464 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 12764974-12765973 Capsella rubella
Carub.0004s2464 2.0kb upstream 2.0kb upstream 5691 true scaffold_4: 12759283-12764973 Capsella rubella
Carub.0004s2464 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 12759283-12761282 Capsella rubella
Carub.0004s2464 2.0kb downstream 2.0kb downstream 5691 true scaffold_4: 12761283-12766973 Capsella rubella
Carub.0004s2464 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 12764974-12766973 Capsella rubella
Carub.0004s2464 5.0kb upstream 5.0kb upstream 8691 true scaffold_4: 12756283-12764973 Capsella rubella
Carub.0004s2464 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 12756283-12761282 Capsella rubella
Carub.0004s2464 5.0kb downstream 5.0kb downstream 8691 true scaffold_4: 12761283-12769973 Capsella rubella
Carub.0004s2464 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 12764974-12769973 Capsella rubella
Carub.0004s2464 10.0kb upstream 10.0kb upstream 13691 true scaffold_4: 12751283-12764973 Capsella rubella
Carub.0004s2464 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 12751283-12761282 Capsella rubella
Carub.0004s2464 10.0kb downstream 10.0kb downstream 13691 true scaffold_4: 12761283-12774973 Capsella rubella
Carub.0004s2464 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 12764974-12774973 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379284 5261 Brassicaceae View MSA
123839829 5264 Brassicales-Malvales View MSA
124338408 5266 SBM View MSA
124240719 5268 Malvidae View MSA
124063738 5270 Rosid View MSA
123737117 5271 Pentapetalae View MSA
122769887 5272 Eudicot View MSA
122044005 5273 Angiosperm View MSA
121310224 5274 Embryophyte View MSA
123347772 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain