Gene : Glyma.03G199900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR24067//PTHR24067:SF102 - UBIQUITIN-CONJUGATING ENZYME E2 Genomic Order:  1999
Name:  ? Glyma.03G199900 Secondary Identifier:  ? PAC:30518667
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7511 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G199900 0.5kb upstream 0.5kb upstream 4952 true Chr03: 40879970-40884921 Glycine max
Glyma.03G199900 0.5kb upstream 0.5kb upstream 500 false Chr03: 40879970-40880469 Glycine max
Glyma.03G199900 0.5kb downstream 0.5kb downstream 4952 true Chr03: 40880470-40885421 Glycine max
Glyma.03G199900 0.5kb downstream 0.5kb downstream 500 false Chr03: 40884922-40885421 Glycine max
Glyma.03G199900 1.0kb upstream 1.0kb upstream 5452 true Chr03: 40879470-40884921 Glycine max
Glyma.03G199900 1.0kb upstream 1.0kb upstream 1000 false Chr03: 40879470-40880469 Glycine max
Glyma.03G199900 1.0kb downstream 1.0kb downstream 5452 true Chr03: 40880470-40885921 Glycine max
Glyma.03G199900 1.0kb downstream 1.0kb downstream 1000 false Chr03: 40884922-40885921 Glycine max
Glyma.03G199900 2.0kb upstream 2.0kb upstream 6452 true Chr03: 40878470-40884921 Glycine max
Glyma.03G199900 2.0kb upstream 2.0kb upstream 2000 false Chr03: 40878470-40880469 Glycine max
Glyma.03G199900 2.0kb downstream 2.0kb downstream 6452 true Chr03: 40880470-40886921 Glycine max
Glyma.03G199900 2.0kb downstream 2.0kb downstream 2000 false Chr03: 40884922-40886921 Glycine max
Glyma.03G199900 5.0kb upstream 5.0kb upstream 9452 true Chr03: 40875470-40884921 Glycine max
Glyma.03G199900 5.0kb upstream 5.0kb upstream 5000 false Chr03: 40875470-40880469 Glycine max
Glyma.03G199900 5.0kb downstream 5.0kb downstream 9452 true Chr03: 40880470-40889921 Glycine max
Glyma.03G199900 5.0kb downstream 5.0kb downstream 5000 false Chr03: 40884922-40889921 Glycine max
Glyma.03G199900 10.0kb upstream 10.0kb upstream 14452 true Chr03: 40870470-40884921 Glycine max
Glyma.03G199900 10.0kb upstream 10.0kb upstream 10000 false Chr03: 40870470-40880469 Glycine max
Glyma.03G199900 10.0kb downstream 10.0kb downstream 14452 true Chr03: 40880470-40894921 Glycine max
Glyma.03G199900 10.0kb downstream 10.0kb downstream 10000 false Chr03: 40884922-40894921 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121617995 5273 Angiosperm View MSA
122254675 5265 Fabidae View MSA
123996730 5270 Rosid View MSA
123571151 5271 Pentapetalae View MSA
122605880 5272 Eudicot View MSA
120890121 5274 Embryophyte View MSA
122930804 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 85.1901 0.0 332.653 High  
cufflinks 93.4073 0.0 374.019 High  
cufflinks 110.394 0.0 452.272 High  
cufflinks 87.1111 0.0 383.481 High  
cufflinks 87.2352 0.0 336.817 High  
cufflinks 157.223 0.0 705.559 High High
cufflinks 76.0283 0.0 291.517 High Low
cufflinks 116.233 0.0 481.28 High  
cufflinks 81.8176 0.0 372.676 High  
cufflinks 9.221     High High
cufflinks 7.721     High  
cufflinks 7.255     High  
cufflinks 8.261     High  
cufflinks 8.834     High  
cufflinks 3.768       Low
cufflinks 6.876        
cufflinks 5.451       Low
cufflinks 9.225     High High
cufflinks 7.187        
cufflinks 6.893     High  
cufflinks 7.22     High  
cufflinks 7.347     High  
cufflinks 7.004        
cufflinks 9.062     High High
cufflinks 6.797        
cufflinks 7.324     High  

0 Strain