Gene : AT1G23410 A. thaliana TAIR10
Defline:  (1 of 3) K02977 - small subunit ribosomal protein S27Ae (RP-S27Ae, RPS27A) Genomic Order:  2374
Name:  ? AT1G23410 Secondary Identifier:  ? PAC:19655502
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G23410 0.5kb upstream 0.5kb upstream 1108 true Chr1: 8314424-8315531 Arabidopsis thaliana
AT1G23410 0.5kb upstream 0.5kb upstream 500 false Chr1: 8314424-8314923 Arabidopsis thaliana
AT1G23410 0.5kb downstream 0.5kb downstream 1108 true Chr1: 8314924-8316031 Arabidopsis thaliana
AT1G23410 0.5kb downstream 0.5kb downstream 500 false Chr1: 8315532-8316031 Arabidopsis thaliana
AT1G23410 1.0kb upstream 1.0kb upstream 1608 true Chr1: 8313924-8315531 Arabidopsis thaliana
AT1G23410 1.0kb upstream 1.0kb upstream 1000 false Chr1: 8313924-8314923 Arabidopsis thaliana
AT1G23410 1.0kb downstream 1.0kb downstream 1608 true Chr1: 8314924-8316531 Arabidopsis thaliana
AT1G23410 1.0kb downstream 1.0kb downstream 1000 false Chr1: 8315532-8316531 Arabidopsis thaliana
AT1G23410 2.0kb upstream 2.0kb upstream 2608 true Chr1: 8312924-8315531 Arabidopsis thaliana
AT1G23410 2.0kb upstream 2.0kb upstream 2000 false Chr1: 8312924-8314923 Arabidopsis thaliana
AT1G23410 2.0kb downstream 2.0kb downstream 2608 true Chr1: 8314924-8317531 Arabidopsis thaliana
AT1G23410 2.0kb downstream 2.0kb downstream 2000 false Chr1: 8315532-8317531 Arabidopsis thaliana
AT1G23410 5.0kb upstream 5.0kb upstream 5608 true Chr1: 8309924-8315531 Arabidopsis thaliana
AT1G23410 5.0kb upstream 5.0kb upstream 5000 false Chr1: 8309924-8314923 Arabidopsis thaliana
AT1G23410 5.0kb downstream 5.0kb downstream 5608 true Chr1: 8314924-8320531 Arabidopsis thaliana
AT1G23410 5.0kb downstream 5.0kb downstream 5000 false Chr1: 8315532-8320531 Arabidopsis thaliana
AT1G23410 10.0kb upstream 10.0kb upstream 10608 true Chr1: 8304924-8315531 Arabidopsis thaliana
AT1G23410 10.0kb upstream 10.0kb upstream 10000 false Chr1: 8304924-8314923 Arabidopsis thaliana
AT1G23410 10.0kb downstream 10.0kb downstream 10608 true Chr1: 8314924-8325531 Arabidopsis thaliana
AT1G23410 10.0kb downstream 10.0kb downstream 10000 false Chr1: 8315532-8325531 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365617 5261 Brassicaceae View MSA
123798998 5264 Brassicales-Malvales View MSA
124296566 5266 SBM View MSA
124148679 5268 Malvidae View MSA
123874630 5270 Rosid View MSA
123736823 5271 Pentapetalae View MSA
122788692 5272 Eudicot View MSA
122045257 5273 Angiosperm View MSA
121350332 5274 Embryophyte View MSA
123424740 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.544        
cufflinks 15.294        
cufflinks 3.244        
cufflinks 23.857       High
cufflinks 2.013       Low
cufflinks 23.743       High

0 Strain