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Proteins

Protein annotation (including domain annotation) from Phytozome.
Data sets

Phytomine contains annotated proteome data from the JGI flagship genomes:

As well as the proteomes of other JGI and model organism genomes
Bulk download
Bulk data files for all organisms in Phytozome are available for download from the JGI Download Portal .
Related template queries

Peptide sequence for a specific transcript

GO-Annotations

Children of a specific GO term

GO Terms for a protein or list of proteins

GO Terms for a transcript or list of transcripts

GO term lookup.

Query starting points

These links will take you to the Query Builder pages which allow you to make new queries and create template queries of your own

ProteinDomain, Protein