Gene : Glyma.06G231500 G. max

Defline:  (1 of 7) K00026 - malate dehydrogenase (MDH2) Name:  ? Glyma.06G231500
Secondary Identifier:  ? PAC:30553620

Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Pathway name Organism Name Analysis Method Analysis Status
Gmax GLUCONEO-PWY gluconeogenesis I Glycine max pathologic  
Gmax PWY-5464 superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle Glycine max pathologic  
Gmax PWY-561 superpathway of glyoxylate cycle and fatty acid degradation Glycine max pathologic  
Gmax PWY-7115 C4 photosynthetic carbon assimilation cycle, NAD-ME type Glycine max pathologic  
Gmax GLYOXYLATE-BYPASS glyoxylate cycle Glycine max pathologic  
Gmax PWY-5690 TCA cycle II (plants and fungi) Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

4 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G231500 5.0kb upstream 5.0kb upstream 9494   true Chr06: 36227185-36236678 Glycine max
Glyma.06G231500 5.0kb upstream 5.0kb upstream 5000   false Chr06: 36227185-36232184 Glycine max
Glyma.06G231500 5.0kb downstream 5.0kb downstream 9494   true Chr06: 36232185-36241678 Glycine max
Glyma.06G231500 5.0kb downstream 5.0kb downstream 5000   false Chr06: 36236679-36241678 Glycine max

237 Homologs


Gene . Primary Identifier

Ortholog _ Organism . Short Name

Ortholog _ Gene . Primary Identifier
Glyma.06G231500 C. papaya evm.TU.supercontig_131.66
Glyma.06G231500 G. max Glyma.12G159300
Glyma.06G231500 R. communis 30150.t000004
Glyma.06G231500 G. max Glyma.12G159300
Glyma.06G231500 C. sinensis orange1.1g018314m.g
Glyma.06G231500 G. max Glyma.12G159300
Glyma.06G231500 A. thaliana AT3G15020
Glyma.06G231500 A. thaliana AT1G53240
Glyma.06G231500 G. max Glyma.12G159300
Glyma.06G231500 E. salsugineum Thhalv10011552m.g
Glyma.06G231500 G. max Glyma.12G159300
Glyma.06G231500 C. clementina Ciclev10008562m.g
Glyma.06G231500 G. max Glyma.12G159300
Glyma.06G231500 C. rubella Carubv10009646m.g
Glyma.06G231500 G. max Glyma.12G159300
Glyma.06G231500 M. domestica MDP0000710761
Glyma.06G231500 G. max Glyma.12G159300
Glyma.06G231500 L. usitatissimum Lus10038323.g
Glyma.06G231500 L. usitatissimum Lus10017939.g
Glyma.06G231500 G. max Glyma.12G159300
Glyma.06G231500 P. trichocarpa Potri.001G376500
Glyma.06G231500 P. trichocarpa Potri.011G096300
Glyma.06G231500 G. max Glyma.12G159300
Glyma.06G231500 G. raimondii Gorai.002G063300
Glyma.06G231500 G. raimondii Gorai.009G372600
Glyma.06G231500 G. max Glyma.12G159300
Glyma.06G231500 O. lucimarinus estExt_fgenesh1_pg.C_Chr_60162
Glyma.06G231500 G. max Glyma.12G159300
Glyma.06G231500 T. cacao Thecc1EG031715
Glyma.06G231500 G. max Glyma.12G159300

26 Rna Seq Expressionss

Countvariance Method Conflo Count Status Countdispersionvar Library Expression Level Abundance Confhi Locus Expression Level Countuncertaintyvar
1.49168992E8 cufflinks 0.0 10800.3 OK 1.49168992E8 High 146.913 479.184 High 0.0
3.61265E7 cufflinks 0.0 6146.22 OK 3.61265E7 High 86.2404 254.913   0.0
2.35708E7 cufflinks 0.0 5151.98 OK 2.35708E7 High 71.0638 204.998   0.0
3605930.0 cufflinks 0.0 2251.78 OK 3605930.0 High 31.6814 85.1153 Low 0.0
2.76083E7 cufflinks 0.0 5501.83 OK 2.76083E7 High 75.2309 218.925   0.0
2.46892E7 cufflinks 0.0 5252.41 OK 2.46892E7 High 72.8845 210.783   0.0
3.25721E7 cufflinks 0.0 5890.41 OK 3.25721E7 High 81.6341 239.824   0.0
2.60935E7 cufflinks 0.0 5374.58 OK 2.60935E7 High 75.537 219.123   0.0
5.96987E7 cufflinks 0.0 7533.84 OK 5.96987E7 High 103.497 315.784   0.0
  cufflinks   694.766 OK   High 10.651      
  cufflinks   813.571 OK   High 12.896      
  cufflinks   782.554 OK   High 8.198      
  cufflinks   710.655 OK   High 10.891      
  cufflinks   339.185 OK     3.801   Low  
  cufflinks   1148.364 OK   High 18.864      
  cufflinks   228.853 OK     2.238   Low  
  cufflinks   432.811 OK     4.6   Low  
  cufflinks   722.59 OK   High 11.722      
  cufflinks   1328.615 OK   High 24.075      
  cufflinks   1810.685 OK   High 27.274      
  cufflinks   808.387 OK   High 13.918      
  cufflinks   1282.64 OK   High 23.346      
  cufflinks   582.19 OK   High 6.74      
  cufflinks   909.794 OK   High 9.418      
  cufflinks   2595.187 OK   High 42.554   High  
  cufflinks   3840.125 OK   High 61.585   High