Gene : Glyma.12G159300 G. max

Defline:  (1 of 7) K00026 - malate dehydrogenase (MDH2) Name:  ? Glyma.12G159300
Secondary Identifier:  ? PAC:30548136

Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Pathway name Organism Name Analysis Method Analysis Status
Gmax GLUCONEO-PWY gluconeogenesis I Glycine max pathologic  
Gmax PWY-5464 superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle Glycine max pathologic  
Gmax PWY-561 superpathway of glyoxylate cycle and fatty acid degradation Glycine max pathologic  
Gmax PWY-7115 C4 photosynthetic carbon assimilation cycle, NAD-ME type Glycine max pathologic  
Gmax GLYOXYLATE-BYPASS glyoxylate cycle Glycine max pathologic  
Gmax PWY-5690 TCA cycle II (plants and fungi) Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

4 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G159300 5.0kb upstream 5.0kb upstream 8966   true Chr12: 27787400-27796365 Glycine max
Glyma.12G159300 5.0kb upstream 5.0kb upstream 5000   false Chr12: 27791366-27796365 Glycine max
Glyma.12G159300 5.0kb downstream 5.0kb downstream 8966   true Chr12: 27782400-27791365 Glycine max
Glyma.12G159300 5.0kb downstream 5.0kb downstream 5000   false Chr12: 27782400-27787399 Glycine max

237 Homologs


Gene . Primary Identifier

Ortholog _ Organism . Short Name

Ortholog _ Gene . Primary Identifier
Glyma.12G159300 C. papaya evm.TU.supercontig_131.66
Glyma.12G159300 G. max Glyma.06G231500
Glyma.12G159300 R. communis 30150.t000004
Glyma.12G159300 G. max Glyma.06G231500
Glyma.12G159300 C. sinensis orange1.1g018314m.g
Glyma.12G159300 G. max Glyma.06G231500
Glyma.12G159300 A. thaliana AT3G15020
Glyma.12G159300 A. thaliana AT1G53240
Glyma.12G159300 G. max Glyma.06G231500
Glyma.12G159300 E. salsugineum Thhalv10011552m.g
Glyma.12G159300 G. max Glyma.06G231500
Glyma.12G159300 C. clementina Ciclev10008562m.g
Glyma.12G159300 G. max Glyma.06G231500
Glyma.12G159300 C. rubella Carubv10009646m.g
Glyma.12G159300 G. max Glyma.06G231500
Glyma.12G159300 M. domestica MDP0000710761
Glyma.12G159300 G. max Glyma.06G231500
Glyma.12G159300 L. usitatissimum Lus10038323.g
Glyma.12G159300 L. usitatissimum Lus10017939.g
Glyma.12G159300 G. max Glyma.06G231500
Glyma.12G159300 P. trichocarpa Potri.001G376500
Glyma.12G159300 P. trichocarpa Potri.011G096300
Glyma.12G159300 G. max Glyma.06G231500
Glyma.12G159300 G. raimondii Gorai.002G063300
Glyma.12G159300 G. raimondii Gorai.009G372600
Glyma.12G159300 G. max Glyma.06G231500
Glyma.12G159300 O. lucimarinus estExt_fgenesh1_pg.C_Chr_60162
Glyma.12G159300 G. max Glyma.06G231500
Glyma.12G159300 T. cacao Thecc1EG031715
Glyma.12G159300 G. max Glyma.06G231500

26 Rna Seq Expressionss

Countvariance Method Conflo Count Status Countdispersionvar Library Expression Level Abundance Confhi Locus Expression Level Countuncertaintyvar
8.9857702E8 cufflinks 0.0 21033.9 OK 8.9857702E8 High 281.962 1085.63 High 0.0
1.36516992E8 cufflinks 0.0 10436.8 OK 1.36516992E8 High 144.348 467.546   0.0
1.18556E8 cufflinks 0.0 9880.46 OK 1.18556E8 High 135.287 433.463   0.0
8022530.0 cufflinks 0.0 3245.69 OK 8022530.0 High 45.4096 124.664 Low 0.0
1.2584E8 cufflinks 0.0 10112.3 OK 1.2584E8 High 136.32 438.767   0.0
1.83371008E8 cufflinks 0.0 11691.3 OK 1.83371008E8 High 159.769 529.876   0.0
1.47522E8 cufflinks 0.0 10754.2 OK 1.47522E8 High 147.552 480.845   0.0
1.85222E8 cufflinks 0.0 11736.2 OK 1.85222E8 High 163.283 541.978   0.0
3.40135008E8 cufflinks 0.0 14759.9 OK 3.40135008E8 High 200.285 700.806   0.0
  cufflinks   1420.097 OK   High 24.632      
  cufflinks   1836.188 OK   High 32.949      
  cufflinks   1814.282 OK   High 21.555      
  cufflinks   1553.037 OK   High 26.962      
  cufflinks   824.862 OK   High 10.442   Low  
  cufflinks   2293.971 OK   High 42.696      
  cufflinks   596.352 OK   High 6.591   Low  
  cufflinks   1044.428 OK   High 12.587   Low  
  cufflinks   1531.39 OK   High 28.146      
  cufflinks   2580.953 OK   High 52.986      
  cufflinks   4593.781 OK   High 78.39   High  
  cufflinks   1480.4 OK   High 28.929      
  cufflinks   2970.93 OK   High 61.278      
  cufflinks   1419.483 OK   High 18.609      
  cufflinks   2263.882 OK   High 26.436      
  cufflinks   5391.5 OK   High 100.166   High  
  cufflinks   7481.991 OK   High 135.86   High