Gene : Pavir.J37048 P. virgatum

Defline:  (1 of 2) PTHR23257:SF518 - DUAL SPECIFICITY PROTEIN KINASE SHKD Name:  ? Pavir.J37048
Secondary Identifier:  ? PAC:30218705

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

4 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.J37048 5.0kb upstream 5.0kb upstream 4661   true contig64724: 1-4661 Panicum virgatum
Pavir.J37048 5.0kb upstream 5.0kb upstream 1   false contig64724: 1-1 Panicum virgatum
Pavir.J37048 5.0kb downstream 5.0kb downstream 4913   true contig64724: 2-4914 Panicum virgatum
Pavir.J37048 5.0kb downstream 5.0kb downstream 253   false contig64724: 4662-4914 Panicum virgatum

37 Homologs


Gene . Primary Identifier

Ortholog _ Organism . Short Name

Ortholog _ Gene . Primary Identifier
Pavir.J37048 C. papaya evm.TU.supercontig_7.174
Pavir.J37048 M. pusilla CCMP1545 MicpuC2.e_gw1.10.198.1
Pavir.J37048 M. sp. RCC299 est_cluster_kg.Chr_04__41__3200498:1
Pavir.J37048 P. virgatum Traes_6BS_EAABDE59A
Pavir.J37048 V. carteri Vocar.0008s0103
Pavir.J37048 P. virgatum Pavir.Aa01878
Pavir.J37048 P. virgatum Pavir.Gb00537
Pavir.J37048 P. virgatum Pavir.Ga00483
Pavir.J37048 P. virgatum Pavir.Eb02979
Pavir.J37048 P. virgatum Pavir.Aa01826
Pavir.J37048 P. virgatum Pavir.Ab01321
Pavir.J37048 P. virgatum Pavir.Ea02367
Pavir.J37048 D. salina Dusal.0140s00004
Pavir.J37048 P. virgatum Pavir.Ga00483
Pavir.J37048 P. virgatum Pavir.J26637
Pavir.J37048 S. moellendorffii 24258
Pavir.J37048 K. fedtschenkoi Kaladp0087s0055
Pavir.J37048 P. virgatum Pavir.J26637
Pavir.J37048 T. pratense Tp57577_TGAC_v2_gene24928
Pavir.J37048 P. virgatum Pavir.J26637
Pavir.J37048 P. virgatum Pavir.J32939
Pavir.J37048 C. arabica early-release evm.TU.Scaffold_633.363
Pavir.J37048 H. vulgare early-release HORVU6Hr1G039740
Pavir.J37048 P. virgatum Pavir.J06308
Pavir.J37048 P. virgatum Pavir.J26637
Pavir.J37048 P. virgatum Pavir.J32939
Pavir.J37048 P. umbilicalis early-release Pum0289s0020
Pavir.J37048 P. virgatum Pavir.J06308
Pavir.J37048 P. virgatum Pavir.Ga00483
Pavir.J37048 P. virgatum Pavir.Eb02979

26 Rna Seq Expressionss

Countvariance Method Conflo Count Status Countdispersionvar Library Expression Level Abundance Confhi Locus Expression Level Countuncertaintyvar
  cufflinks   381.086 OK     1.985   Low  
  cufflinks   478.785 OK     2.941      
  cufflinks   360.846 OK     2.278      
  cufflinks   514.865 OK     3.097      
  cufflinks   262.69 OK     1.901   Low  
  cufflinks   388.608 OK     1.981   Low  
  cufflinks   291.057 OK     2.093   Low  
  cufflinks   570.809 OK     3.386      
  cufflinks   395.244 OK     2.563      
  cufflinks   340.456 OK     2.344      
  cufflinks   326.172 OK     1.624   Low  
  cufflinks   277.131 OK     1.997   Low  
  cufflinks   528.259 OK     3.278      
  cufflinks   475.751 OK     2.414      
  cufflinks   557.604 OK     3.621   High  
  cufflinks   474.85 OK     3.208      
  cufflinks   804.759 OK   High 5.569   High  
  cufflinks   602.0 OK     2.875      
  cufflinks   454.589 OK     3.251      
  cufflinks   595.602 OK     3.385      
  cufflinks   419.976 OK     2.696      
  cufflinks   415.58 OK     2.883      
  cufflinks   423.026 OK     3.093      
  cufflinks   496.173 OK     3.217      
  cufflinks   428.174 OK     2.749      
  cufflinks   478.299 OK     3.074