Gene : Cagra.1472s0006 C. grandiflora

Defline:  (1 of 4) K00026 - malate dehydrogenase (MDH2) Name:  ? Cagra.1472s0006
Secondary Identifier:  ? PAC:28904816

Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Pathway name Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-5464 superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle Capsella grandiflora pathologic  
Cgrandiflora PWY-561 superpathway of glyoxylate cycle and fatty acid degradation Capsella grandiflora pathologic  
Cgrandiflora PWY-7115 C4 photosynthetic carbon assimilation cycle, NAD-ME type Capsella grandiflora pathologic  
Cgrandiflora GLUCONEO-PWY gluconeogenesis I Capsella grandiflora pathologic  
Cgrandiflora PWY66-399 gluconeogenesis III Capsella grandiflora pathologic  
Cgrandiflora GLYOXYLATE-BYPASS glyoxylate cycle Capsella grandiflora pathologic  
Cgrandiflora PWY-5690 TCA cycle II (plants and fungi) Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

4 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1472s0006 5.0kb upstream 5.0kb upstream 7202   true Scaffold1472: 11023-18224 Capsella grandiflora
Cagra.1472s0006 5.0kb upstream 5.0kb upstream 5000   false Scaffold1472: 11023-16022 Capsella grandiflora
Cagra.1472s0006 5.0kb downstream 5.0kb downstream 7202   true Scaffold1472: 16023-23224 Capsella grandiflora
Cagra.1472s0006 5.0kb downstream 5.0kb downstream 5000   false Scaffold1472: 18225-23224 Capsella grandiflora

142 Homologs


Gene . Primary Identifier

Ortholog _ Organism . Short Name

Ortholog _ Gene . Primary Identifier
Cagra.1472s0006 C. grandiflora GSVIVG01014231001
Cagra.1472s0006 A. halleri Araha.52017s0001
Cagra.1472s0006 C. papaya evm.TU.supercontig_131.66
Cagra.1472s0006 R. communis 30150.t000004
Cagra.1472s0006 C. sativus Cucsa.273480
Cagra.1472s0006 C. sinensis orange1.1g018314m.g
Cagra.1472s0006 A. thaliana AT1G53240
Cagra.1472s0006 E. salsugineum Thhalv10011552m.g
Cagra.1472s0006 C. clementina Ciclev10008562m.g
Cagra.1472s0006 C. rubella Carubv10009646m.g
Cagra.1472s0006 M. domestica MDP0000710761
Cagra.1472s0006 L. usitatissimum Lus10038323.g
Cagra.1472s0006 L. usitatissimum Lus10017939.g
Cagra.1472s0006 P. trichocarpa Potri.001G376500
Cagra.1472s0006 G. raimondii Gorai.002G063300
Cagra.1472s0006 G. raimondii Gorai.009G372600
Cagra.1472s0006 C. subellipsoidea C-169 estExt_Genewise1.C_40150
Cagra.1472s0006 M. pusilla CCMP1545 estExt_fgenesh2_kg.C_2_t20073
Cagra.1472s0006 C. grandiflora Cagra.0882s0005
Cagra.1472s0006 C. grandiflora Cagra.7229s0002
Cagra.1472s0006 M. sp. RCC299 fgenesh2_kg.C_Chr_08000007
Cagra.1472s0006 O. lucimarinus estExt_fgenesh1_pg.C_Chr_60162
Cagra.1472s0006 T. cacao Thecc1EG031715
Cagra.1472s0006 P. virgatum Pavir.J08443
Cagra.1472s0006 P. virgatum Pavir.Ca00978
Cagra.1472s0006 P. virgatum Pavir.J12238
Cagra.1472s0006 G. max Glyma.06G231500
Cagra.1472s0006 G. max Glyma.12G159300
Cagra.1472s0006 B. rapa FPsc Brara.H00143
Cagra.1472s0006 B. stricta Bostr.0124s0116

0 Rna Seq Expressions