Gene : Potri.010G173900 P. trichocarpa

Defline:  LEM3 (ligand-effect modulator 3) family protein; CDC50 family protein; similar to GI:4585976; similar to GI:4966357; similar to GI:4835763; similar to GI:9757735 from (Arabidopsis thaliana); [ co-ortholog (1of2) of At3g12740, At1g54320, ] Name:  ? Potri.010G173900
Secondary Identifier:  ? PAC:26979501

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

4 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.010G173900 5.0kb upstream 5.0kb upstream 9798   true Chr10: 17440671-17450468 Populus trichocarpa
Potri.010G173900 5.0kb upstream 5.0kb upstream 5000   false Chr10: 17445469-17450468 Populus trichocarpa
Potri.010G173900 5.0kb downstream 5.0kb downstream 9798   true Chr10: 17435671-17445468 Populus trichocarpa
Potri.010G173900 5.0kb downstream 5.0kb downstream 5000   false Chr10: 17435671-17440670 Populus trichocarpa

266 Homologs


Gene . Primary Identifier

Ortholog _ Organism . Short Name

Ortholog _ Gene . Primary Identifier
Potri.010G173900 C. papaya evm.TU.supercontig_32.90
Potri.010G173900 P. trichocarpa Potri.008G082100
Potri.010G173900 C. sinensis orange1.1g018560m.g
Potri.010G173900 P. trichocarpa Potri.008G082100
Potri.010G173900 A. thaliana AT1G54320
Potri.010G173900 A. thaliana AT1G79450
Potri.010G173900 A. thaliana AT3G12740
Potri.010G173900 P. trichocarpa Potri.008G082100
Potri.010G173900 E. salsugineum Thhalv10021053m.g
Potri.010G173900 E. salsugineum Thhalv10018802m.g
Potri.010G173900 E. salsugineum Thhalv10011617m.g
Potri.010G173900 P. trichocarpa Potri.008G082100
Potri.010G173900 C. clementina Ciclev10005291m.g
Potri.010G173900 P. trichocarpa Potri.008G082100
Potri.010G173900 C. rubella Carubv10014082m.g
Potri.010G173900 C. rubella Carubv10020558m.g
Potri.010G173900 C. rubella Carubv10009602m.g
Potri.010G173900 P. trichocarpa Potri.008G082100
Potri.010G173900 M. domestica MDP0000213757
Potri.010G173900 P. trichocarpa Potri.008G082100
Potri.010G173900 R. communis 30125.t000018
Potri.010G173900 P. trichocarpa Potri.008G082100
Potri.010G173900 P. trichocarpa Cucsa.118580
Potri.010G173900 C. sativus Potri.008G082100
Potri.010G173900 V. vinifera GSVIVG01036722001
Potri.010G173900 P. trichocarpa Potri.008G082100
Potri.010G173900 L. usitatissimum Lus10001834.g
Potri.010G173900 L. usitatissimum Lus10001762.g
Potri.010G173900 P. trichocarpa Potri.008G082100
Potri.010G173900 F. vesca gene19707-v1.0-hybrid

40 Rna Seq Expressionss

Countvariance Method Conflo Count Status Countdispersionvar Library Expression Level Abundance Confhi Locus Expression Level Countuncertaintyvar
  cufflinks   747.082 OK     1.916      
  cufflinks   904.052 OK     2.527      
  cufflinks   2845.145 OK     9.449   High  
  cufflinks   361.086 OK     0.968   Low  
  cufflinks   1977.541 OK     6.712   High  
  cufflinks   611.145 OK     1.601   Low  
  cufflinks   651.81 OK     1.859      
  cufflinks   709.0 OK     2.657      
  cufflinks   2512.702 OK     7.636   High  
  cufflinks   1010.483 OK     3.846      
  cufflinks   758.486 OK     2.531      
  cufflinks   947.097 OK     3.496      
  cufflinks   1113.155 OK     2.457      
  cufflinks   1861.023 OK     6.174   High  
  cufflinks   688.748 OK     1.837      
  cufflinks   868.899 OK     3.067      
  cufflinks   599.306 OK     1.845      
  cufflinks   701.248 OK     2.169      
  cufflinks   722.48 OK     2.075      
  cufflinks   933.084 OK     3.472      
  cufflinks   613.552 OK     1.811      
  cufflinks   872.416 OK     3.25      
  cufflinks   769.964 OK     2.646      
  cufflinks   704.757 OK     2.258      
  cufflinks     OK     24.633      
  cufflinks     OK   High 32.912   High  
  cufflinks     OK   High 32.119      
  cufflinks     OK     24.007      
  cufflinks     OK     26.843      
  cufflinks     OK   High 34.893   High