Gene : Potri.011G082100 P. trichocarpa

Defline:  (1 of 1) PTHR10926:SF29 - ALA-INTERACTING SUBUNIT 2-RELATED Name:  ? Potri.011G082100
Secondary Identifier:  ? PAC:27001162

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

4 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.011G082100 5.0kb upstream 5.0kb upstream 9150   true Chr11: 8241388-8250537 Populus trichocarpa
Potri.011G082100 5.0kb upstream 5.0kb upstream 5000   false Chr11: 8245538-8250537 Populus trichocarpa
Potri.011G082100 5.0kb downstream 5.0kb downstream 9150   true Chr11: 8236388-8245537 Populus trichocarpa
Potri.011G082100 5.0kb downstream 5.0kb downstream 5000   false Chr11: 8236388-8241387 Populus trichocarpa

127 Homologs


Gene . Primary Identifier

Ortholog _ Organism . Short Name

Ortholog _ Gene . Primary Identifier
Potri.011G082100 C. sinensis orange1.1g019301m.g
Potri.011G082100 A. thaliana AT5G46150
Potri.011G082100 E. salsugineum Thhalv10000949m.g
Potri.011G082100 C. clementina Ciclev10015828m.g
Potri.011G082100 C. rubella Carubv10026706m.g
Potri.011G082100 R. communis 28331.t000001
Potri.011G082100 P. trichocarpa Cucsa.047920
Potri.011G082100 V. vinifera GSVIVG01021535001
Potri.011G082100 L. usitatissimum Lus10038516.g
Potri.011G082100 L. usitatissimum Lus10023290.g
Potri.011G082100 F. vesca gene30377-v1.0-hybrid
Potri.011G082100 C. subellipsoidea C-169 fgenesh1_pm.6_#_223
Potri.011G082100 P. trichocarpa Potri.010G173900
Potri.011G082100 P. trichocarpa Potri.008G082100
Potri.011G082100 P. trichocarpa Potri.004G081100
Potri.011G082100 P. trichocarpa Potri.017G139300
Potri.011G082100 P. trichocarpa Potri.001G381500
Potri.011G082100 M. pusilla CCMP1545 e_gw1.13.417.1
Potri.011G082100 P. trichocarpa Potri.010G173900
Potri.011G082100 P. trichocarpa Potri.008G082100
Potri.011G082100 P. trichocarpa Potri.004G081100
Potri.011G082100 P. trichocarpa Potri.017G139300
Potri.011G082100 P. trichocarpa Potri.001G381500
Potri.011G082100 M. sp. RCC299 EuGene.1600010218
Potri.011G082100 P. trichocarpa Potri.010G173900
Potri.011G082100 P. trichocarpa Potri.008G082100
Potri.011G082100 P. trichocarpa Potri.004G081100
Potri.011G082100 P. trichocarpa Potri.017G139300
Potri.011G082100 P. trichocarpa Potri.001G381500
Potri.011G082100 P. trichocarpa estExt_GenewiseEukaryote.C_Chr_10444

40 Rna Seq Expressionss

Countvariance Method Conflo Count Status Countdispersionvar Library Expression Level Abundance Confhi Locus Expression Level Countuncertaintyvar
  cufflinks   847.918 OK     1.724   High  
  cufflinks   559.398 OK     1.224      
  cufflinks   519.284 OK     1.353      
  cufflinks   453.986 OK     0.954   Low  
  cufflinks   456.457 OK     1.21      
  cufflinks   539.556 OK     1.108      
  cufflinks   503.544 OK     1.126      
  cufflinks   571.162 OK     1.668   High  
  cufflinks   460.126 OK     1.105      
  cufflinks   390.937 OK     1.166      
  cufflinks   425.276 OK     1.112      
  cufflinks   427.032 OK     1.235      
  cufflinks   1364.566 OK     2.373   High  
  cufflinks   483.702 OK     1.257      
  cufflinks   596.7 OK     1.241      
  cufflinks   562.186 OK     1.555      
  cufflinks   484.415 OK     1.169      
  cufflinks   453.642 OK     1.098      
  cufflinks   740.544 OK     1.676   High  
  cufflinks   362.708 OK     1.057      
  cufflinks   453.809 OK     1.05      
  cufflinks   529.578 OK     1.548      
  cufflinks   449.799 OK     1.208      
  cufflinks   510.607 OK     1.282      
  cufflinks     OK     12.448      
  cufflinks     OK     11.498      
  cufflinks     OK     14.021   High  
  cufflinks     OK     14.231   High  
  cufflinks     OK     13.428      
  cufflinks     OK     13.217