Gene : Potri.017G139300 P. trichocarpa

Defline:  (1 of 4) PTHR10926//PTHR10926:SF28 - CELL CYCLE CONTROL PROTEIN 50 // SUBFAMILY NOT NAMED Name:  ? Potri.017G139300
Secondary Identifier:  ? PAC:26983723

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

4 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.017G139300 5.0kb upstream 5.0kb upstream 9365   true Chr17: 14732786-14742150 Populus trichocarpa
Potri.017G139300 5.0kb upstream 5.0kb upstream 5000   false Chr17: 14732786-14737785 Populus trichocarpa
Potri.017G139300 5.0kb downstream 5.0kb downstream 9365   true Chr17: 14737786-14747150 Populus trichocarpa
Potri.017G139300 5.0kb downstream 5.0kb downstream 5000   false Chr17: 14742151-14747150 Populus trichocarpa

220 Homologs


Gene . Primary Identifier

Ortholog _ Organism . Short Name

Ortholog _ Gene . Primary Identifier
Potri.017G139300 C. papaya evm.TU.supercontig_178.34
Potri.017G139300 P. trichocarpa Potri.004G081100
Potri.017G139300 C. sinensis orange1.1g046680m.g
Potri.017G139300 P. trichocarpa Potri.004G081100
Potri.017G139300 C. clementina Ciclev10012117m.g
Potri.017G139300 P. trichocarpa Potri.004G081100
Potri.017G139300 R. communis 30171.t000001
Potri.017G139300 P. trichocarpa Potri.004G081100
Potri.017G139300 P. trichocarpa Cucsa.108700
Potri.017G139300 C. sativus Potri.004G081100
Potri.017G139300 C. subellipsoidea C-169 fgenesh1_pm.6_#_223
Potri.017G139300 P. trichocarpa Potri.010G173900
Potri.017G139300 P. trichocarpa Potri.008G082100
Potri.017G139300 P. trichocarpa Potri.004G081100
Potri.017G139300 P. trichocarpa Potri.011G082100
Potri.017G139300 P. trichocarpa Potri.001G381500
Potri.017G139300 M. pusilla CCMP1545 e_gw1.13.417.1
Potri.017G139300 P. trichocarpa Potri.010G173900
Potri.017G139300 P. trichocarpa Potri.008G082100
Potri.017G139300 P. trichocarpa Potri.004G081100
Potri.017G139300 P. trichocarpa Potri.011G082100
Potri.017G139300 P. trichocarpa Potri.001G381500
Potri.017G139300 M. sp. RCC299 EuGene.1600010218
Potri.017G139300 P. trichocarpa Potri.010G173900
Potri.017G139300 P. trichocarpa Potri.008G082100
Potri.017G139300 P. trichocarpa Potri.004G081100
Potri.017G139300 P. trichocarpa Potri.011G082100
Potri.017G139300 P. trichocarpa Potri.001G381500
Potri.017G139300 P. trichocarpa estExt_GenewiseEukaryote.C_Chr_10444
Potri.017G139300 O. lucimarinus Potri.010G173900

40 Rna Seq Expressionss

Countvariance Method Conflo Count Status Countdispersionvar Library Expression Level Abundance Confhi Locus Expression Level Countuncertaintyvar
  cufflinks   1165.873 OK     5.367      
  cufflinks   909.923 OK     4.43      
  cufflinks   589.099 OK     3.406   Low  
  cufflinks   975.611 OK     4.57      
  cufflinks   709.913 OK     4.193      
  cufflinks   711.211 OK     3.223   Low  
  cufflinks   716.635 OK     3.549   Low  
  cufflinks   589.758 OK     3.826   Low  
  cufflinks   743.637 OK     3.961      
  cufflinks   944.054 OK     6.254   High  
  cufflinks   1138.833 OK     6.61   High  
  cufflinks   1037.624 OK     6.661   High  
  cufflinks   1282.772 OK     4.989      
  cufflinks   682.875 OK     3.933      
  cufflinks   755.892 OK     3.503   Low  
  cufflinks   815.376 OK     5.005      
  cufflinks   970.58 OK     5.197      
  cufflinks   1151.566 OK     6.179   High  
  cufflinks   1171.2 OK     5.919      
  cufflinks   984.269 OK     6.367   High  
  cufflinks   978.92 OK     5.016      
  cufflinks   820.241 OK     5.317      
  cufflinks   1033.686 OK     6.173   High  
  cufflinks   992.731 OK     5.532      
  cufflinks     OK   High 29.418      
  cufflinks     OK     23.829      
  cufflinks     OK     23.459   Low  
  cufflinks     OK   High 30.534      
  cufflinks     OK   High 29.529      
  cufflinks     OK     25.775