Gene : Potri.001G218100 P. trichocarpa

Defline:  (1 of 9) PTHR24362:SF258 - SERINE/THREONINE-PROTEIN KINASE NEK5 Name:  ? Potri.001G218100
Secondary Identifier:  ? PAC:27044178

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

4 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G218100 5.0kb upstream 5.0kb upstream 12178   true Chr01: 22393396-22405573 Populus trichocarpa
Potri.001G218100 5.0kb upstream 5.0kb upstream 5000   false Chr01: 22393396-22398395 Populus trichocarpa
Potri.001G218100 5.0kb downstream 5.0kb downstream 12178   true Chr01: 22398396-22410573 Populus trichocarpa
Potri.001G218100 5.0kb downstream 5.0kb downstream 5000   false Chr01: 22405574-22410573 Populus trichocarpa

278 Homologs


Gene . Primary Identifier

Ortholog _ Organism . Short Name

Ortholog _ Gene . Primary Identifier
Potri.001G218100 C. papaya evm.TU.supercontig_754.4
Potri.001G218100 P. trichocarpa Potri.009G020100
Potri.001G218100 C. sinensis orange1.1g043248m.g
Potri.001G218100 P. trichocarpa Potri.009G020100
Potri.001G218100 A. thaliana AT3G44200
Potri.001G218100 P. trichocarpa Potri.009G020100
Potri.001G218100 E. salsugineum Thhalv10010103m.g
Potri.001G218100 P. trichocarpa Potri.009G020100
Potri.001G218100 C. clementina Ciclev10027754m.g
Potri.001G218100 P. trichocarpa Potri.009G020100
Potri.001G218100 C. rubella Carubv10016647m.g
Potri.001G218100 P. trichocarpa Potri.009G020100
Potri.001G218100 R. communis 30055.t000104
Potri.001G218100 P. trichocarpa Potri.009G020100
Potri.001G218100 P. trichocarpa Cucsa.185890
Potri.001G218100 C. sativus Potri.009G020100
Potri.001G218100 V. vinifera GSVIVG01037558001
Potri.001G218100 P. trichocarpa Potri.009G020100
Potri.001G218100 L. usitatissimum Lus10001857.g
Potri.001G218100 L. usitatissimum Lus10013338.g
Potri.001G218100 P. trichocarpa Potri.009G020100
Potri.001G218100 F. vesca gene27061-v1.0-hybrid
Potri.001G218100 P. trichocarpa Potri.009G020100
Potri.001G218100 C. subellipsoidea C-169 Genemark1.5109_g
Potri.001G218100 P. trichocarpa Potri.001G018700
Potri.001G218100 P. trichocarpa Potri.003G205400
Potri.001G218100 P. trichocarpa Potri.016G051900
Potri.001G218100 P. trichocarpa Potri.013G039000
Potri.001G218100 P. trichocarpa Potri.005G051600
Potri.001G218100 P. trichocarpa Potri.002G049400

40 Rna Seq Expressionss

Countvariance Method Conflo Count Status Countdispersionvar Library Expression Level Abundance Confhi Locus Expression Level Countuncertaintyvar
  cufflinks   693.286 OK     1.859      
  cufflinks   918.57 OK     2.574      
  cufflinks   1178.671 OK     3.928   High  
  cufflinks   669.559 OK     1.802      
  cufflinks   599.559 OK     2.047      
  cufflinks   366.294 OK     0.963   Low  
  cufflinks   459.958 OK     1.316   Low  
  cufflinks   207.606 OK     0.778   Low  
  cufflinks   490.564 OK     1.507      
  cufflinks   639.73 OK     2.445      
  cufflinks   707.234 OK     2.367      
  cufflinks   600.201 OK     2.222      
  cufflinks   412.707 OK     0.927   Low  
  cufflinks   684.328 OK     2.277      
  cufflinks   555.075 OK     1.48      
  cufflinks   810.528 OK     2.867      
  cufflinks   1496.168 OK     4.626   High  
  cufflinks   787.798 OK     2.444      
  cufflinks   1015.721 OK     2.973      
  cufflinks   579.513 OK     2.161      
  cufflinks   1360.834 OK     4.031   High  
  cufflinks   705.338 OK     2.637      
  cufflinks   921.423 OK     3.175      
  cufflinks   1562.695 OK     5.024   High  
  cufflinks     OK     13.551      
  cufflinks     OK     6.058   Low  
  cufflinks     OK     6.202   Low  
  cufflinks     OK     8.987      
  cufflinks     OK     11.937      
  cufflinks     OK     12.992