Gene : Potri.004G081100 P. trichocarpa

Defline:  (1 of 4) PTHR10926//PTHR10926:SF28 - CELL CYCLE CONTROL PROTEIN 50 // SUBFAMILY NOT NAMED Name:  ? Potri.004G081100
Secondary Identifier:  ? PAC:26990171

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

4 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.004G081100 5.0kb upstream 5.0kb upstream 9250   true Chr04: 6688094-6697343 Populus trichocarpa
Potri.004G081100 5.0kb upstream 5.0kb upstream 5000   false Chr04: 6692344-6697343 Populus trichocarpa
Potri.004G081100 5.0kb downstream 5.0kb downstream 9250   true Chr04: 6683094-6692343 Populus trichocarpa
Potri.004G081100 5.0kb downstream 5.0kb downstream 5000   false Chr04: 6683094-6688093 Populus trichocarpa

220 Homologs


Gene . Primary Identifier

Ortholog _ Organism . Short Name

Ortholog _ Gene . Primary Identifier
Potri.004G081100 C. papaya evm.TU.supercontig_178.34
Potri.004G081100 P. trichocarpa Potri.017G139300
Potri.004G081100 C. sinensis orange1.1g046680m.g
Potri.004G081100 P. trichocarpa Potri.017G139300
Potri.004G081100 C. clementina Ciclev10012117m.g
Potri.004G081100 P. trichocarpa Potri.017G139300
Potri.004G081100 R. communis 30171.t000001
Potri.004G081100 P. trichocarpa Potri.017G139300
Potri.004G081100 P. trichocarpa Cucsa.108700
Potri.004G081100 C. sativus Potri.017G139300
Potri.004G081100 C. subellipsoidea C-169 fgenesh1_pm.6_#_223
Potri.004G081100 P. trichocarpa Potri.010G173900
Potri.004G081100 P. trichocarpa Potri.008G082100
Potri.004G081100 P. trichocarpa Potri.017G139300
Potri.004G081100 P. trichocarpa Potri.011G082100
Potri.004G081100 P. trichocarpa Potri.001G381500
Potri.004G081100 M. pusilla CCMP1545 e_gw1.13.417.1
Potri.004G081100 P. trichocarpa Potri.010G173900
Potri.004G081100 P. trichocarpa Potri.008G082100
Potri.004G081100 P. trichocarpa Potri.017G139300
Potri.004G081100 P. trichocarpa Potri.011G082100
Potri.004G081100 P. trichocarpa Potri.001G381500
Potri.004G081100 M. sp. RCC299 EuGene.1600010218
Potri.004G081100 P. trichocarpa Potri.010G173900
Potri.004G081100 P. trichocarpa Potri.008G082100
Potri.004G081100 P. trichocarpa Potri.017G139300
Potri.004G081100 P. trichocarpa Potri.011G082100
Potri.004G081100 P. trichocarpa Potri.001G381500
Potri.004G081100 P. trichocarpa estExt_GenewiseEukaryote.C_Chr_10444
Potri.004G081100 O. lucimarinus Potri.010G173900

40 Rna Seq Expressionss

Countvariance Method Conflo Count Status Countdispersionvar Library Expression Level Abundance Confhi Locus Expression Level Countuncertaintyvar
  cufflinks   331.623 OK     1.42   High  
  cufflinks   28.856 OK     0.136      
  cufflinks   8.779 OK   Low 0.049      
  cufflinks   41.467 OK     0.191      
  cufflinks   9.602 OK   Low 0.055      
  cufflinks   17.002 OK   Low 0.077      
  cufflinks   30.263 OK   Low 0.147      
  cufflinks   1.134 OK   Low 0.007   Low  
  cufflinks   13.565 OK   Low 0.07      
  cufflinks   19.178 OK   Low 0.124      
  cufflinks   27.944 OK     0.158      
  cufflinks   14.921 OK   Low 0.093      
  cufflinks   627.227 OK     2.341   High  
  cufflinks   13.222 OK   Low 0.074      
  cufflinks   18.954 OK   Low 0.086      
  cufflinks   54.005 OK     0.322      
  cufflinks   75.02 OK     0.39      
  cufflinks   31.593 OK     0.165      
  cufflinks   228.995 OK     1.1   High  
  cufflinks   14.08 OK   Low 0.089      
  cufflinks   68.598 OK     0.342      
  cufflinks   27.883 OK     0.176      
  cufflinks   22.958 OK   Low 0.133      
  cufflinks   58.009 OK     0.315      
  cufflinks     OK   Not Expressed 0.0   Not Expressed  
  cufflinks     OK   Low 0.312      
  cufflinks     OK     0.531      
  cufflinks     OK   Low 0.138      
  cufflinks     OK   Low 0.188      
  cufflinks     OK   Low 0.225