Gene : Potri.005G051600 P. trichocarpa

Defline:  protein kinase family protein; similar to protein kinase domain containing protein; similar to serine/threonine protein kinase domain containing protein; [ co-ortholog (1of3) of At1g54510, ] Name:  ? Potri.005G051600
Secondary Identifier:  ? PAC:27028543

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

4 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.005G051600 5.0kb upstream 5.0kb upstream 11947   true Chr05: 3689981-3701927 Populus trichocarpa
Potri.005G051600 5.0kb upstream 5.0kb upstream 5000   false Chr05: 3696928-3701927 Populus trichocarpa
Potri.005G051600 5.0kb downstream 5.0kb downstream 11947   true Chr05: 3684981-3696927 Populus trichocarpa
Potri.005G051600 5.0kb downstream 5.0kb downstream 5000   false Chr05: 3684981-3689980 Populus trichocarpa

273 Homologs


Gene . Primary Identifier

Ortholog _ Organism . Short Name

Ortholog _ Gene . Primary Identifier
Potri.005G051600 C. papaya evm.TU.supercontig_117.74
Potri.005G051600 P. trichocarpa Potri.013G039000
Potri.005G051600 C. sinensis orange1.1g008303m.g
Potri.005G051600 P. trichocarpa Potri.013G039000
Potri.005G051600 A. thaliana AT1G54510
Potri.005G051600 P. trichocarpa Potri.013G039000
Potri.005G051600 E. salsugineum Thhalv10003908m.g
Potri.005G051600 E. salsugineum Thhalv10020328m.g
Potri.005G051600 P. trichocarpa Potri.013G039000
Potri.005G051600 C. clementina Ciclev10000599m.g
Potri.005G051600 P. trichocarpa Potri.013G039000
Potri.005G051600 C. rubella Carubv10019975m.g
Potri.005G051600 P. trichocarpa Potri.013G039000
Potri.005G051600 M. domestica MDP0000319801
Potri.005G051600 M. domestica MDP0000197837
Potri.005G051600 P. trichocarpa Potri.013G039000
Potri.005G051600 R. communis 30128.t000073
Potri.005G051600 P. trichocarpa Potri.013G039000
Potri.005G051600 P. trichocarpa Cucsa.133400
Potri.005G051600 C. sativus Potri.013G039000
Potri.005G051600 V. vinifera GSVIVG01021831001
Potri.005G051600 P. trichocarpa Potri.013G039000
Potri.005G051600 L. usitatissimum Lus10015928.g
Potri.005G051600 L. usitatissimum Lus10009186.g
Potri.005G051600 P. trichocarpa Potri.013G039000
Potri.005G051600 F. vesca gene16529-v1.0-hybrid
Potri.005G051600 P. trichocarpa Potri.013G039000
Potri.005G051600 C. subellipsoidea C-169 Genemark1.5109_g
Potri.005G051600 P. trichocarpa Potri.001G018700
Potri.005G051600 P. trichocarpa Potri.001G218100

40 Rna Seq Expressionss

Countvariance Method Conflo Count Status Countdispersionvar Library Expression Level Abundance Confhi Locus Expression Level Countuncertaintyvar
  cufflinks   309.218 OK     1.753   Low  
  cufflinks   1037.403 OK     6.005      
  cufflinks   833.956 OK     5.741      
  cufflinks   670.088 OK     3.737      
  cufflinks   559.876 OK     3.942      
  cufflinks   533.888 OK     2.878      
  cufflinks   449.243 OK     2.653      
  cufflinks   272.804 OK     2.108   Low  
  cufflinks   392.547 OK     2.489      
  cufflinks   1351.231 OK   High 10.672   High  
  cufflinks   963.331 OK     6.659      
  cufflinks   1364.654 OK   High 10.435   High  
  cufflinks   161.697 OK     0.762   Low  
  cufflinks   504.649 OK     3.461      
  cufflinks   656.571 OK     3.62      
  cufflinks   923.854 OK     6.757      
  cufflinks   744.316 OK     4.746      
  cufflinks   1117.904 OK     7.146      
  cufflinks   377.545 OK     2.339      
  cufflinks   1139.612 OK     8.787   High  
  cufflinks   685.794 OK     4.187      
  cufflinks   977.618 OK     7.553      
  cufflinks   1160.623 OK     8.256   High  
  cufflinks   768.045 OK     5.096      
  cufflinks     OK     4.892      
  cufflinks     OK     4.831      
  cufflinks     OK     5.627      
  cufflinks     OK     4.659      
  cufflinks     OK     13.711   High  
  cufflinks     OK     5.292