Gene : mMDH2 A. thaliana

Primary Identifier:  ? AT3G15020 Defline:  Lactate/malate dehydrogenase family protein
Name:  ? AT3G15020 Secondary Identifier:  ? PAC:19661585

Sequence Feature Displayer

Ontology Annotation Displayer

12 Pathways

Pathway Identifier Pathway name Organism Name Analysis Method Analysis Status
Athaliana PWY-5464 superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle Arabidopsis thaliana pathologic  
Athaliana PWY-5464 superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle Arabidopsis thaliana pathologic  
Athaliana PWY-7115 C4 photosynthetic carbon assimilation cycle, NAD-ME type Arabidopsis thaliana pathologic  
Athaliana PWY-7115 C4 photosynthetic carbon assimilation cycle, NAD-ME type Arabidopsis thaliana pathologic  
Athaliana PWY-561 superpathway of glyoxylate cycle and fatty acid degradation Arabidopsis thaliana pathologic  
Athaliana PWY-561 superpathway of glyoxylate cycle and fatty acid degradation Arabidopsis thaliana pathologic  
Athaliana GLUCONEO-PWY gluconeogenesis I Arabidopsis thaliana pathologic  
Athaliana GLUCONEO-PWY gluconeogenesis I Arabidopsis thaliana pathologic  
Athaliana PWY66-399 gluconeogenesis III Arabidopsis thaliana pathologic  
Athaliana PWY66-399 gluconeogenesis III Arabidopsis thaliana pathologic  
Athaliana PWY-5690 TCA cycle II (plants and fungi) Arabidopsis thaliana pathologic  
Athaliana GLYOXYLATE-BYPASS glyoxylate cycle Arabidopsis thaliana pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

4 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G15020 5.0kb upstream 5.0kb upstream 7181   true Chr3: 5051068-5058248 Arabidopsis thaliana
AT3G15020 5.0kb upstream 5.0kb upstream 5000   false Chr3: 5051068-5056067 Arabidopsis thaliana
AT3G15020 5.0kb downstream 5.0kb downstream 7181   true Chr3: 5056068-5063248 Arabidopsis thaliana
AT3G15020 5.0kb downstream 5.0kb downstream 5000   false Chr3: 5058249-5063248 Arabidopsis thaliana

220 Homologs


Gene . Primary Identifier

Ortholog _ Organism . Short Name

Ortholog _ Gene . Primary Identifier
AT3G15020 C. sinensis orange1.1g018314m.g
AT3G15020 A. thaliana AT1G53240
AT3G15020 C. papaya evm.TU.supercontig_131.66
AT3G15020 A. thaliana AT1G53240
AT3G15020 R. communis 30150.t000004
AT3G15020 A. thaliana AT1G53240
AT3G15020 A. thaliana Cucsa.273480
AT3G15020 C. sativus AT1G53240
AT3G15020 V. vinifera GSVIVG01014231001
AT3G15020 A. thaliana AT1G53240
AT3G15020 C. clementina Ciclev10008562m.g
AT3G15020 A. thaliana AT1G53240
AT3G15020 A. thaliana MDP0000710761
AT3G15020 M. domestica AT1G53240
AT3G15020 L. usitatissimum Lus10038323.g
AT3G15020 L. usitatissimum Lus10017939.g
AT3G15020 A. thaliana AT1G53240
AT3G15020 P. trichocarpa Potri.001G376500
AT3G15020 P. trichocarpa Potri.011G096300
AT3G15020 A. thaliana AT1G53240
AT3G15020 G. raimondii Gorai.002G063300
AT3G15020 G. raimondii Gorai.009G372600
AT3G15020 A. thaliana AT1G53240
AT3G15020 C. subellipsoidea C-169 estExt_Genewise1.C_40150
AT3G15020 A. thaliana AT1G53240
AT3G15020 M. pusilla CCMP1545 estExt_fgenesh2_kg.C_2_t20073
AT3G15020 M. pusilla CCMP1545 fgenesh3_kg.11_#_29_#_isotig01016
AT3G15020 A. thaliana AT1G53240
AT3G15020 M. sp. RCC299 fgenesh2_kg.C_Chr_08000007
AT3G15020 A. thaliana AT1G53240

6 Rna Seq Expressionss

Countvariance Method Conflo Count Status Countdispersionvar Library Expression Level Abundance Confhi Locus Expression Level Countuncertaintyvar
  cufflinks   660.235 OK     5.904      
  cufflinks   1054.077 OK     13.718   High  
  cufflinks   587.185 OK     6.102      
  cufflinks   516.854 OK     4.682   Low  
  cufflinks   688.197 OK     9.344      
  cufflinks   622.434 OK     7.999