Gene : mMDH1 A. thaliana

Primary Identifier:  ? AT1G53240 Defline:  Lactate/malate dehydrogenase family protein
Name:  ? AT1G53240 Secondary Identifier:  ? PAC:19654695

Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Pathway name Organism Name Analysis Method Analysis Status
Athaliana PWY-5464 superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle Arabidopsis thaliana pathologic  
Athaliana PWY-7115 C4 photosynthetic carbon assimilation cycle, NAD-ME type Arabidopsis thaliana pathologic  
Athaliana PWY-561 superpathway of glyoxylate cycle and fatty acid degradation Arabidopsis thaliana pathologic  
Athaliana GLUCONEO-PWY gluconeogenesis I Arabidopsis thaliana pathologic  
Athaliana PWY66-399 gluconeogenesis III Arabidopsis thaliana pathologic  
Athaliana PWY-5690 TCA cycle II (plants and fungi) Arabidopsis thaliana pathologic  
Athaliana GLYOXYLATE-BYPASS glyoxylate cycle Arabidopsis thaliana pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

4 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G53240 5.0kb upstream 5.0kb upstream 7323   true Chr1: 19854615-19861937 Arabidopsis thaliana
AT1G53240 5.0kb upstream 5.0kb upstream 5000   false Chr1: 19856938-19861937 Arabidopsis thaliana
AT1G53240 5.0kb downstream 5.0kb downstream 7323   true Chr1: 19849615-19856937 Arabidopsis thaliana
AT1G53240 5.0kb downstream 5.0kb downstream 5000   false Chr1: 19849615-19854614 Arabidopsis thaliana

224 Homologs


Gene . Primary Identifier

Ortholog _ Organism . Short Name

Ortholog _ Gene . Primary Identifier
AT1G53240 C. sinensis orange1.1g018314m.g
AT1G53240 A. thaliana AT3G15020
AT1G53240 C. papaya evm.TU.supercontig_131.66
AT1G53240 A. thaliana AT3G15020
AT1G53240 R. communis 30150.t000004
AT1G53240 A. thaliana AT3G15020
AT1G53240 A. thaliana Cucsa.273480
AT1G53240 C. sativus AT3G15020
AT1G53240 V. vinifera GSVIVG01014231001
AT1G53240 A. thaliana AT3G15020
AT1G53240 E. salsugineum Thhalv10011552m.g
AT1G53240 C. clementina Ciclev10008562m.g
AT1G53240 A. thaliana AT3G15020
AT1G53240 C. rubella Carubv10009646m.g
AT1G53240 A. thaliana MDP0000710761
AT1G53240 M. domestica AT3G15020
AT1G53240 L. usitatissimum Lus10038323.g
AT1G53240 L. usitatissimum Lus10017939.g
AT1G53240 A. thaliana AT3G15020
AT1G53240 P. trichocarpa Potri.001G376500
AT1G53240 P. trichocarpa Potri.011G096300
AT1G53240 A. thaliana AT3G15020
AT1G53240 G. raimondii Gorai.002G063300
AT1G53240 G. raimondii Gorai.009G372600
AT1G53240 A. thaliana AT3G15020
AT1G53240 C. subellipsoidea C-169 estExt_Genewise1.C_40150
AT1G53240 A. thaliana AT3G15020
AT1G53240 M. pusilla CCMP1545 estExt_fgenesh2_kg.C_2_t20073
AT1G53240 M. pusilla CCMP1545 fgenesh3_kg.11_#_29_#_isotig01016
AT1G53240 A. thaliana AT3G15020

6 Rna Seq Expressionss

Countvariance Method Conflo Count Status Countdispersionvar Library Expression Level Abundance Confhi Locus Expression Level Countuncertaintyvar
  cufflinks   6257.594 OK   High 105.064   High  
  cufflinks   3984.36 OK   High 97.291      
  cufflinks   4224.324 OK   High 82.395      
  cufflinks   4481.366 OK   High 76.198      
  cufflinks   3282.245 OK   High 83.708      
  cufflinks   3129.875 OK   High 75.801