Gene : Eucgr.F01209 E. grandis

Defline:  (1 of 5) K00026 - malate dehydrogenase (MDH2) Name:  ? Eucgr.F01209
Secondary Identifier:  ? PAC:32053233

Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Pathway name Organism Name Analysis Method Analysis Status
Egrandis PWY-561 superpathway of glyoxylate cycle and fatty acid degradation Eucalyptus grandis pathologic  
Egrandis PWY-5464 superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle Eucalyptus grandis pathologic  
Egrandis PWY-7115 C4 photosynthetic carbon assimilation cycle, NAD-ME type Eucalyptus grandis pathologic  
Egrandis GLUCONEO-PWY gluconeogenesis I Eucalyptus grandis pathologic  
Egrandis PWY66-399 gluconeogenesis III Eucalyptus grandis pathologic  
Egrandis PWY-5690 TCA cycle II (plants and fungi) Eucalyptus grandis pathologic  
Egrandis GLYOXYLATE-BYPASS glyoxylate cycle Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

4 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F01209 5.0kb upstream 5.0kb upstream 8342   true Chr06: 16255211-16263552 Eucalyptus grandis
Eucgr.F01209 5.0kb upstream 5.0kb upstream 5000   false Chr06: 16258553-16263552 Eucalyptus grandis
Eucgr.F01209 5.0kb downstream 5.0kb downstream 8342   true Chr06: 16250211-16258552 Eucalyptus grandis
Eucgr.F01209 5.0kb downstream 5.0kb downstream 5000   false Chr06: 16250211-16255210 Eucalyptus grandis

182 Homologs


Gene . Primary Identifier

Ortholog _ Organism . Short Name

Ortholog _ Gene . Primary Identifier
Eucgr.F01209 E. grandis GSVIVG01014231001
Eucgr.F01209 E. grandis orange1.1g018314m.g
Eucgr.F01209 C. sinensis Eucgr.F03251
Eucgr.F01209 E. grandis AT3G15020
Eucgr.F01209 E. grandis AT1G53240
Eucgr.F01209 A. halleri Araha.52017s0001
Eucgr.F01209 A. halleri Araha.5485s0004
Eucgr.F01209 E. grandis Eucgr.F03251
Eucgr.F01209 E. grandis Cagra.1472s0006
Eucgr.F01209 E. grandis Pavir.J08443
Eucgr.F01209 E. grandis Pavir.Ca00978
Eucgr.F01209 E. grandis Pavir.J12238
Eucgr.F01209 P. virgatum Eucgr.F03251
Eucgr.F01209 E. grandis Brara.H00143
Eucgr.F01209 E. grandis Brara.F00129
Eucgr.F01209 E. grandis Brara.E01474
Eucgr.F01209 E. grandis Bostr.0124s0116
Eucgr.F01209 E. grandis Cre12.g483950
Eucgr.F01209 C. reinhardtii Eucgr.F03251
Eucgr.F01209 E. grandis GRMZM2G154595
Eucgr.F01209 E. grandis GRMZM2G466833
Eucgr.F01209 Z. mays Eucgr.F03251
Eucgr.F01209 E. grandis Medtr8g463760
Eucgr.F01209 E. grandis SapurV1A.0303s0030
Eucgr.F01209 E. grandis SapurV1A.0020s0030
Eucgr.F01209 T. aestivum early-release Traes_1BL_BD3E22844
Eucgr.F01209 T. aestivum early-release Traes_3B_7779FCCA8
Eucgr.F01209 E. grandis Eucgr.F03251
Eucgr.F01209 C. papaya evm.TU.supercontig_131.66
Eucgr.F01209 R. communis 30150.t000004

6 Rna Seq Expressionss

Countvariance Method Conflo Count Status Countdispersionvar Library Expression Level Abundance Confhi Locus Expression Level Countuncertaintyvar
85809.0 cufflinks 0.0 453.167 OK 85809.0 High 109.831 251.823   0.0
46210.7 cufflinks 0.0 342.513 OK 46210.7 High 80.5633 181.689   0.0
53206.7 cufflinks 0.0 365.324 OK 53206.7 High 88.0869 199.323   0.0
119464.0 cufflinks 0.0 524.653 OK 119464.0 High 123.71 286.708 High 0.0
20371.5 cufflinks 0.0 233.413 OK 20371.5 High 56.4545 125.497 Low 0.0
85102.0 cufflinks 0.0 451.498 OK 85102.0 High 106.739 244.671   0.0