Gene : evm_27.TU.AmTr_v1.0_scaffold00021.87 A. trichopoda

Defline:  (1 of 4) K00026 - malate dehydrogenase (MDH2) Name:  ? evm_27.TU.AmTr_v1.0_scaffold00021.87
Secondary Identifier:  ? PAC:31563375

Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Pathway name Organism Name Analysis Method Analysis Status
Atrichopoda GLUCONEO-PWY gluconeogenesis I Amborella trichopoda pathologic  
Atrichopoda PWY-5464 superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle Amborella trichopoda pathologic  
Atrichopoda PWY-7115 C4 photosynthetic carbon assimilation cycle, NAD-ME type Amborella trichopoda pathologic  
Atrichopoda PWY-561 superpathway of glyoxylate cycle and fatty acid degradation Amborella trichopoda pathologic  
Atrichopoda PWY-5690 TCA cycle II (plants and fungi) Amborella trichopoda pathologic  
Atrichopoda GLYOXYLATE-BYPASS glyoxylate cycle Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

4 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00021.87 5.0kb upstream 5.0kb upstream 15779   true AmTr_v1.0_scaffold00021: 1861609-1877387 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.87 5.0kb upstream 5.0kb upstream 5000   false AmTr_v1.0_scaffold00021: 1872388-1877387 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.87 5.0kb downstream 5.0kb downstream 15779   true AmTr_v1.0_scaffold00021: 1856609-1872387 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.87 5.0kb downstream 5.0kb downstream 5000   false AmTr_v1.0_scaffold00021: 1856609-1861608 Amborella trichopoda

146 Homologs


Gene . Primary Identifier

Ortholog _ Organism . Short Name

Ortholog _ Gene . Primary Identifier
evm_27.TU.AmTr_v1.0_scaffold00021.87 A. trichopoda GSVIVG01014231001
evm_27.TU.AmTr_v1.0_scaffold00021.87 A. trichopoda orange1.1g018314m.g
evm_27.TU.AmTr_v1.0_scaffold00021.87 A. halleri Araha.52017s0001
evm_27.TU.AmTr_v1.0_scaffold00021.87 A. halleri Araha.5485s0004
evm_27.TU.AmTr_v1.0_scaffold00021.87 A. trichopoda Cagra.1472s0006
evm_27.TU.AmTr_v1.0_scaffold00021.87 A. trichopoda Pavir.J08443
evm_27.TU.AmTr_v1.0_scaffold00021.87 A. trichopoda Pavir.Ca00978
evm_27.TU.AmTr_v1.0_scaffold00021.87 A. trichopoda Pavir.J12238
evm_27.TU.AmTr_v1.0_scaffold00021.87 A. trichopoda Brara.H00143
evm_27.TU.AmTr_v1.0_scaffold00021.87 A. trichopoda Brara.F00129
evm_27.TU.AmTr_v1.0_scaffold00021.87 A. trichopoda Brara.E01474
evm_27.TU.AmTr_v1.0_scaffold00021.87 A. trichopoda Bostr.0124s0116
evm_27.TU.AmTr_v1.0_scaffold00021.87 A. trichopoda Cre12.g483950
evm_27.TU.AmTr_v1.0_scaffold00021.87 A. trichopoda GRMZM2G154595
evm_27.TU.AmTr_v1.0_scaffold00021.87 A. trichopoda GRMZM2G466833
evm_27.TU.AmTr_v1.0_scaffold00021.87 A. trichopoda Medtr8g463760
evm_27.TU.AmTr_v1.0_scaffold00021.87 A. trichopoda SapurV1A.0303s0030
evm_27.TU.AmTr_v1.0_scaffold00021.87 A. trichopoda SapurV1A.0020s0030
evm_27.TU.AmTr_v1.0_scaffold00021.87 S. polyrhiza Spipo14G0023600
evm_27.TU.AmTr_v1.0_scaffold00021.87 S. polyrhiza Spipo26G0020300
evm_27.TU.AmTr_v1.0_scaffold00021.87 C. papaya evm.TU.supercontig_131.66
evm_27.TU.AmTr_v1.0_scaffold00021.87 R. communis 29900.t000052
evm_27.TU.AmTr_v1.0_scaffold00021.87 C. sativus Cucsa.273480
evm_27.TU.AmTr_v1.0_scaffold00021.87 A. thaliana AT3G15020
evm_27.TU.AmTr_v1.0_scaffold00021.87 A. thaliana AT1G53240
evm_27.TU.AmTr_v1.0_scaffold00021.87 E. salsugineum Thhalv10011552m.g
evm_27.TU.AmTr_v1.0_scaffold00021.87 C. clementina Ciclev10008562m.g
evm_27.TU.AmTr_v1.0_scaffold00021.87 C. rubella Carubv10009646m.g
evm_27.TU.AmTr_v1.0_scaffold00021.87 M. domestica MDP0000710761
evm_27.TU.AmTr_v1.0_scaffold00021.87 L. usitatissimum Lus10038323.g

0 Rna Seq Expressions