Gene : Cucsa.173200 C. sativus v1.0
Defline:  (1 of 29) PF13966 - zinc-binding in reverse transcriptase (zf-RVT) Genomic Order:  2
Name:  ? Cucsa.173200 Secondary Identifier:  ? PAC:16966611
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.173200 0.5kb upstream 0.5kb upstream 1711 true scaffold01202: 7994-9704 Cucumis sativus
Cucsa.173200 0.5kb upstream 0.5kb upstream 500 false scaffold01202: 9205-9704 Cucumis sativus
Cucsa.173200 0.5kb downstream 0.5kb downstream 1711 true scaffold01202: 7494-9204 Cucumis sativus
Cucsa.173200 0.5kb downstream 0.5kb downstream 500 false scaffold01202: 7494-7993 Cucumis sativus
Cucsa.173200 1.0kb upstream 1.0kb upstream 2211 true scaffold01202: 7994-10204 Cucumis sativus
Cucsa.173200 1.0kb upstream 1.0kb upstream 1000 false scaffold01202: 9205-10204 Cucumis sativus
Cucsa.173200 1.0kb downstream 1.0kb downstream 2211 true scaffold01202: 6994-9204 Cucumis sativus
Cucsa.173200 1.0kb downstream 1.0kb downstream 1000 false scaffold01202: 6994-7993 Cucumis sativus
Cucsa.173200 2.0kb upstream 2.0kb upstream 2995 true scaffold01202: 7994-10988 Cucumis sativus
Cucsa.173200 2.0kb upstream 2.0kb upstream 1784 false scaffold01202: 9205-10988 Cucumis sativus
Cucsa.173200 2.0kb downstream 2.0kb downstream 3211 true scaffold01202: 5994-9204 Cucumis sativus
Cucsa.173200 2.0kb downstream 2.0kb downstream 2000 false scaffold01202: 5994-7993 Cucumis sativus
Cucsa.173200 5.0kb upstream 5.0kb upstream 2995 true scaffold01202: 7994-10988 Cucumis sativus
Cucsa.173200 5.0kb upstream 5.0kb upstream 1784 false scaffold01202: 9205-10988 Cucumis sativus
Cucsa.173200 5.0kb downstream 5.0kb downstream 6211 true scaffold01202: 2994-9204 Cucumis sativus
Cucsa.173200 5.0kb downstream 5.0kb downstream 5000 false scaffold01202: 2994-7993 Cucumis sativus
Cucsa.173200 10.0kb upstream 10.0kb upstream 2995 true scaffold01202: 7994-10988 Cucumis sativus
Cucsa.173200 10.0kb upstream 10.0kb upstream 1784 false scaffold01202: 9205-10988 Cucumis sativus
Cucsa.173200 10.0kb downstream 10.0kb downstream 9204 true scaffold01202: 1-9204 Cucumis sativus
Cucsa.173200 10.0kb downstream 10.0kb downstream 7993 false scaffold01202: 1-7993 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121603682 5273 Angiosperm Singleton cluster - no MSA
122233931 5265 Fabidae Singleton cluster - no MSA
123980157 5270 Rosid Singleton cluster - no MSA
123555834 5271 Pentapetalae Singleton cluster - no MSA
122590648 5272 Eudicot Singleton cluster - no MSA
120875972 5274 Embryophyte Singleton cluster - no MSA
122916863 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain