Gene : Cre06.g278300 C. reinhardtii

Defline:  (1 of 1) PTHR10926:SF0 - PROTEIN CHAT-1, ISOFORM A Name:  ? Cre06.g278300
Secondary Identifier:  ? PAC:30779896

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

4 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre06.g278300 5.0kb upstream 5.0kb upstream 7792   true chromosome_6: 4828652-4836443 Chlamydomonas reinhardtii
Cre06.g278300 5.0kb upstream 5.0kb upstream 5000   false chromosome_6: 4831444-4836443 Chlamydomonas reinhardtii
Cre06.g278300 5.0kb downstream 5.0kb downstream 7792   true chromosome_6: 4823652-4831443 Chlamydomonas reinhardtii
Cre06.g278300 5.0kb downstream 5.0kb downstream 5000   false chromosome_6: 4823652-4828651 Chlamydomonas reinhardtii

449 Homologs


Gene . Primary Identifier

Ortholog _ Organism . Short Name

Ortholog _ Gene . Primary Identifier
Cre06.g278300 C. papaya evm.TU.supercontig_178.34
Cre06.g278300 C. papaya evm.TU.supercontig_32.90
Cre06.g278300 R. communis 28331.t000001
Cre06.g278300 R. communis 30125.t000018
Cre06.g278300 R. communis 29939.t000012
Cre06.g278300 R. communis 30171.t000001
Cre06.g278300 V. vinifera GSVIVG01021535001
Cre06.g278300 V. vinifera GSVIVG01036722001
Cre06.g278300 A. thaliana AT5G46150
Cre06.g278300 A. thaliana AT1G54320
Cre06.g278300 A. thaliana AT1G79450
Cre06.g278300 A. thaliana AT3G12740
Cre06.g278300 A. thaliana AT1G16360
Cre06.g278300 E. salsugineum Thhalv10021053m.g
Cre06.g278300 E. salsugineum Thhalv10018802m.g
Cre06.g278300 E. salsugineum Thhalv10000949m.g
Cre06.g278300 E. salsugineum Thhalv10011617m.g
Cre06.g278300 C. clementina Ciclev10013434m.g
Cre06.g278300 C. clementina Ciclev10015828m.g
Cre06.g278300 C. clementina Ciclev10005291m.g
Cre06.g278300 C. clementina Ciclev10012117m.g
Cre06.g278300 C. rubella Carubv10026706m.g
Cre06.g278300 C. rubella Carubv10014082m.g
Cre06.g278300 C. rubella Carubv10012317m.g
Cre06.g278300 C. rubella Carubv10020558m.g
Cre06.g278300 C. rubella Carubv10009602m.g
Cre06.g278300 L. usitatissimum Lus10038516.g
Cre06.g278300 L. usitatissimum Lus10034744.g
Cre06.g278300 L. usitatissimum Lus10033283.g
Cre06.g278300 L. usitatissimum Lus10001834.g

133 Rna Seq Expressionss

Countvariance Method Conflo Count Status Countdispersionvar Library Expression Level Abundance Confhi Locus Expression Level Countuncertaintyvar
4073.66 cufflinks 8.4042 173.004 OK 4073.66 High 32.0586 55.7129 Low 0.0
293855.0 cufflinks 5.14499 1250.0 OK 293855.0 High 38.7822 72.4193 High 0.0
147352.0 cufflinks 0.0 722.299 OK 147352.0 High 67.8448 139.957   0.0
206694.0 cufflinks 4.87949 1063.96 OK 206694.0 High 33.5624 62.2454   0.0
138934.0 cufflinks 0.0 702.363 OK 138934.0 High 64.1629 132.264   0.0
133505.0 cufflinks 1.76129 793.365 OK 133505.0 High 22.3227 42.884   0.0
234485.0 cufflinks 4.8464 1127.22 OK 234485.0 High 34.4137 63.981   0.0
195697.0 cufflinks 7.30204 1002.22 OK 195697.0 High 62.2993 117.296   0.0
153372.0 cufflinks 6.92996 895.677 OK 153372.0 High 55.2111 103.492   0.0
39727.7 cufflinks 0.0 386.979 OK 39727.7 High 35.9951 73.0744 Low 0.0
209413.0 cufflinks 4.88815 1070.34 OK 209413.0 High 33.7313 62.5745   0.0
148281.0 cufflinks 1.675 831.766 OK 148281.0 High 22.6091 43.5431   0.0
199191.0 cufflinks 27.14 2002.44 OK 199191.0 High 48.9682 70.7965   0.0
12863.6 cufflinks 12.4747 296.001 OK 12863.6 High 53.3869 94.2991   0.0
13470.5 cufflinks 12.1387 302.344 OK 13470.5 High 52.2656 92.3925   0.0
200225.0 cufflinks 0.0 835.894 OK 200225.0 High 75.4336 156.195   0.0
13372.5 cufflinks 12.013 301.332 OK 13372.5 High 51.6742 91.3353   0.0
39695.1 cufflinks 0.0 386.828 OK 39695.1 High 38.7703 78.7078 Low 0.0
8991.21 cufflinks 9.99793 250.863 OK 8991.21 High 40.9694 71.9408   0.0
137740.0 cufflinks 1.73038 804.608 OK 137740.0   22.3329 42.9355   0.0
247291.0 cufflinks 4.71111 1155.0 OK 247291.0 High 33.9168 63.1226   0.0
6516.32 cufflinks 11.0065 215.92 OK 6516.32 High 43.6279 76.2493   0.0
11762.1 cufflinks 12.5424 284.044 OK 11762.1 High 53.0639 93.5855   0.0
318722.0 cufflinks 7.52133 1256.63 OK 318722.0 High 74.1174 140.713 High 0.0
97444.3 cufflinks 0.0 593.364 OK 97444.3 High 57.6074 118.22   0.0
236114.0 cufflinks 4.50224 1130.8 OK 236114.0 High 32.0269 59.5516   0.0
237679.0 cufflinks 4.97967 1134.22 OK 237679.0 High 35.4834 65.9872   0.0
5250.83 cufflinks 9.35974 195.097 OK 5250.83 High 36.3963 63.4329 Low 0.0
86924.0 cufflinks 0.0 562.0 OK 86924.0 High 55.9553 114.664   0.0
4631.77 cufflinks 8.67652 183.872 OK 4631.77 High 33.4055 58.1344 Low 0.0