Gene : MDY4 C. reinhardtii

Primary Identifier:  ? Cre12.g483950 Defline:  NAD-dependent malate dehydrogenase, mitochondrial
Name:  ? Cre12.g483950 Secondary Identifier:  ? PAC:30793306

Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Pathway name Organism Name Analysis Method Analysis Status
Creinhardtii PWY66-399 gluconeogenesis III Chlamydomonas reinhardtii pathologic  
Creinhardtii GLUCONEO-PWY gluconeogenesis I Chlamydomonas reinhardtii pathologic  
Creinhardtii PWY-5464 superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle Chlamydomonas reinhardtii pathologic  
Creinhardtii PWY-561 superpathway of glyoxylate cycle and fatty acid degradation Chlamydomonas reinhardtii pathologic  
Creinhardtii PWY-7115 C4 photosynthetic carbon assimilation cycle, NAD-ME type Chlamydomonas reinhardtii pathologic  
Creinhardtii PWY-5690 TCA cycle II (plants and fungi) Chlamydomonas reinhardtii pathologic  
Creinhardtii GLYOXYLATE-BYPASS glyoxylate cycle Chlamydomonas reinhardtii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

4 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre12.g483950 5.0kb upstream 5.0kb upstream 7622   true chromosome_12: 87426-95047 Chlamydomonas reinhardtii
Cre12.g483950 5.0kb upstream 5.0kb upstream 5000   false chromosome_12: 87426-92425 Chlamydomonas reinhardtii
Cre12.g483950 5.0kb downstream 5.0kb downstream 7622   true chromosome_12: 92426-100047 Chlamydomonas reinhardtii
Cre12.g483950 5.0kb downstream 5.0kb downstream 5000   false chromosome_12: 95048-100047 Chlamydomonas reinhardtii

162 Homologs


Gene . Primary Identifier

Ortholog _ Organism . Short Name

Ortholog _ Gene . Primary Identifier
Cre12.g483950 C. papaya evm.TU.supercontig_131.66
Cre12.g483950 R. communis 30150.t000004
Cre12.g483950 R. communis 29900.t000052
Cre12.g483950 V. vinifera GSVIVG01021185001
Cre12.g483950 V. vinifera GSVIVG01014231001
Cre12.g483950 A. thaliana AT3G15020
Cre12.g483950 A. thaliana AT1G53240
Cre12.g483950 E. salsugineum Thhalv10011552m.g
Cre12.g483950 C. clementina Ciclev10016114m.g
Cre12.g483950 C. clementina Ciclev10008562m.g
Cre12.g483950 C. rubella Carubv10009646m.g
Cre12.g483950 L. usitatissimum Lus10038323.g
Cre12.g483950 L. usitatissimum Lus10013680.g
Cre12.g483950 L. usitatissimum Lus10017939.g
Cre12.g483950 P. trichocarpa Potri.T143500
Cre12.g483950 P. trichocarpa Potri.001G376500
Cre12.g483950 P. trichocarpa Potri.004G054200
Cre12.g483950 P. trichocarpa Potri.011G096300
Cre12.g483950 G. raimondii Gorai.002G063300
Cre12.g483950 G. raimondii Gorai.009G372600
Cre12.g483950 C. subellipsoidea C-169 estExt_Genewise1.C_40150
Cre12.g483950 M. pusilla CCMP1545 fgenesh3_kg.11_#_29_#_isotig01016
Cre12.g483950 M. sp. RCC299 fgenesh2_kg.C_Chr_08000007
Cre12.g483950 T. cacao Thecc1EG029739
Cre12.g483950 T. cacao Thecc1EG031715
Cre12.g483950 A. halleri Araha.43982s0004
Cre12.g483950 A. halleri Araha.25108s0003
Cre12.g483950 C. grandiflora Cagra.1472s0006
Cre12.g483950 P. virgatum Pavir.J08443
Cre12.g483950 P. virgatum Pavir.Ca00978

133 Rna Seq Expressionss

Countvariance Method Conflo Count Status Countdispersionvar Library Expression Level Abundance Confhi Locus Expression Level Countuncertaintyvar
168242.0 cufflinks 32.3405 978.709 OK 168242.0 High 199.869 367.398 Low 0.0
3.05993E7 cufflinks 2.8351 11137.2 OK 3.05993E7 High 427.332 851.83 High 0.0
969845.0 cufflinks 0.0 1792.24 OK 969845.0 High 211.227 443.359   0.0
2.14274E7 cufflinks 1.92561 9308.23 OK 2.14274E7 High 356.548 711.17   0.0
1548460.0 cufflinks 0.0 2252.79 OK 1548460.0 High 255.466 537.688   0.0
1.26342E7 cufflinks 0.0 6798.41 OK 1.26342E7 High 213.007 435.744   0.0
2.27258E7 cufflinks 2.0036 9586.37 OK 2.27258E7 High 369.042 736.079   0.0
2335720.0 cufflinks 7.4897 3164.75 OK 2335720.0 High 219.192 430.894   0.0
2431790.0 cufflinks 7.29805 3224.12 OK 2431790.0 High 223.494 439.689   0.0
2618960.0 cufflinks 0.0 2913.6 OK 2618960.0 High 317.17 669.506 High 0.0
4235290.0 cufflinks 4.45694 4231.25 OK 4235290.0 High 163.572 322.686 Low 0.0
1.23008E7 cufflinks 0.0 6704.54 OK 1.23008E7 High 212.107 434.02   0.0
4864020.0 cufflinks 145.108 9794.79 OK 4864020.0 High 263.992 382.875   0.0
201328.0 cufflinks 38.993 1064.09 OK 201328.0 High 248.902 458.811   0.0
167294.0 cufflinks 37.6464 976.14 OK 167294.0 High 232.424 427.202   0.0
999694.0 cufflinks 0.0 1818.98 OK 999694.0 High 218.314 458.317   0.0
179553.0 cufflinks 38.4083 1008.81 OK 179553.0 High 240.166 441.923   0.0
3167490.0 cufflinks 0.0 3198.04 OK 3167490.0 High 350.057 739.678 High 0.0
196675.0 cufflinks 36.8229 1052.53 OK 196675.0 High 234.079 431.335   0.0
1.45331E7 cufflinks 0.0 7314.62 OK 1.45331E7 High 227.569 464.778   0.0
7428250.0 cufflinks 2.88529 5527.16 OK 7428250.0 High 209.296 415.706 Low 0.0
297043.0 cufflinks 39.569 1276.25 OK 297043.0 High 271.185 502.801   0.0
234050.0 cufflinks 42.0731 1141.59 OK 234050.0 High 276.014 509.954 High 0.0
2478160.0 cufflinks 6.91657 3252.24 OK 2478160.0 High 216.692 426.467   0.0
1810030.0 cufflinks 0.0 2431.57 OK 1810030.0 High 272.609 574.275   0.0
1.89076E7 cufflinks 1.92374 8743.59 OK 1.89076E7 High 357.831 713.739   0.0
1.94599E7 cufflinks 1.83223 8870.11 OK 1.94599E7 High 342.58 683.328   0.0
245306.0 cufflinks 36.5585 1166.91 OK 245306.0 High 241.912 447.265   0.0
678189.0 cufflinks 0.0 1504.96 OK 678189.0 High 183.597 384.528 Low 0.0
311714.0 cufflinks 38.9004 1305.41 OK 311714.0 High 268.994 499.088   0.0