Gene : Cre01.g004350 C. reinhardtii

Defline:  (1 of 1) K12200 - programmed cell death 6-interacting protein (PDCD6IP, ALIX, RIM20) Name:  ? Cre01.g004350
Secondary Identifier:  ? PAC:30788641

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

4 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre01.g004350 5.0kb upstream 5.0kb upstream 14050   true chromosome_1: 836529-850578 Chlamydomonas reinhardtii
Cre01.g004350 5.0kb upstream 5.0kb upstream 5000   false chromosome_1: 836529-841528 Chlamydomonas reinhardtii
Cre01.g004350 5.0kb downstream 5.0kb downstream 14050   true chromosome_1: 841529-855578 Chlamydomonas reinhardtii
Cre01.g004350 5.0kb downstream 5.0kb downstream 5000   false chromosome_1: 850579-855578 Chlamydomonas reinhardtii

101 Homologs


Gene . Primary Identifier

Ortholog _ Organism . Short Name

Ortholog _ Gene . Primary Identifier
Cre01.g004350 C. papaya evm.TU.supercontig_65.100
Cre01.g004350 R. communis 28565.t000005
Cre01.g004350 V. vinifera GSVIVG01011794001
Cre01.g004350 A. thaliana AT1G15130
Cre01.g004350 E. salsugineum Thhalv10006787m.g
Cre01.g004350 C. clementina Ciclev10014287m.g
Cre01.g004350 C. rubella Carubv10008299m.g
Cre01.g004350 L. usitatissimum Lus10034634.g
Cre01.g004350 L. usitatissimum Lus10035265.g
Cre01.g004350 P. trichocarpa Potri.010G116400
Cre01.g004350 P. trichocarpa Potri.008G126900
Cre01.g004350 G. raimondii Gorai.005G192900
Cre01.g004350 F. vesca gene03621-v1.0-hybrid
Cre01.g004350 C. subellipsoidea C-169 estExt_Genewise1Plus.C_110372
Cre01.g004350 M. pusilla CCMP1545 estExt_Genewise1.C_1_t20358
Cre01.g004350 M. sp. RCC299 estExt_fgenesh2_pg.C_Chr_070247
Cre01.g004350 T. cacao Thecc1EG009148
Cre01.g004350 M. guttatus Migut.E00398
Cre01.g004350 A. halleri Araha.12397s0004
Cre01.g004350 G. max Glyma.20G124000
Cre01.g004350 G. max Glyma.10G266600
Cre01.g004350 B. rapa FPsc Brara.I04944
Cre01.g004350 B. rapa FPsc Brara.F01028
Cre01.g004350 B. stricta Bostr.7128s0128
Cre01.g004350 C. reinhardtii e_gwEuk.12.34.1
Cre01.g004350 C. reinhardtii Spipo17G0044600
Cre01.g004350 C. reinhardtii Spipo1G0019900
Cre01.g004350 C. reinhardtii GSMUA_Achr11G22120_001
Cre01.g004350 C. reinhardtii GSMUA_Achr11G01880_001
Cre01.g004350 V. carteri Vocar.0013s0045

133 Rna Seq Expressionss

Countvariance Method Conflo Count Status Countdispersionvar Library Expression Level Abundance Confhi Locus Expression Level Countuncertaintyvar
1189.73 cufflinks 2.22361 94.8954 OK 1189.73   8.14386 14.0641 Low 0.0
51305.6 cufflinks 1.61881 558.922 OK 51305.6   8.54318 15.4676   0.0
22254.5 cufflinks 0.0 292.863 OK 22254.5   14.5788 29.4312   0.0
58843.3 cufflinks 1.65269 596.038 OK 58843.3   8.88362 16.1145   0.0
7855.07 cufflinks 0.0 175.591 OK 7855.07   8.23871 16.5556 Low 0.0
49161.7 cufflinks 0.811356 504.671 OK 49161.7   6.68819 12.565   0.0
58248.8 cufflinks 1.69329 593.213 OK 58248.8   9.0889 16.4845   0.0
22295.0 cufflinks 2.01691 365.286 OK 22295.0   11.0531 20.0893 Low 0.0
19717.7 cufflinks 1.92978 344.491 OK 19717.7   10.4442 18.9587 Low 0.0
12692.3 cufflinks 0.0 222.738 OK 12692.3   10.341 20.8018   0.0
20178.8 cufflinks 1.10808 355.52 OK 20178.8   5.51621 9.92434 Low 0.0
44094.4 cufflinks 0.811602 480.614 OK 44094.4   6.43243 12.0533   0.0
84553.3 cufflinks 8.15034 1319.72 OK 84553.3   14.5716 20.9929   0.0
2050.35 cufflinks 3.11582 124.234 OK 2050.35   11.4958 19.8757   0.0
1774.9 cufflinks 2.96898 115.755 OK 1774.9   10.9118 18.8546   0.0
81119.7 cufflinks 0.0 543.835 OK 81119.7   27.2107 55.712 High 0.0
3120.68 cufflinks 3.8294 152.304 OK 3120.68   14.3733 24.9172   0.0
32413.6 cufflinks 0.0 351.029 OK 32413.6   16.2927 33.0053   0.0
1909.35 cufflinks 2.91563 119.978 OK 1909.35   10.7351 18.5546   0.0
48340.0 cufflinks 0.807161 500.866 OK 48340.0   6.61254 12.4179   0.0
64064.7 cufflinks 1.73747 620.19 OK 64064.7   9.45479 17.1721   0.0
2453.23 cufflinks 3.19856 135.578 OK 2453.23   11.8752 20.5519   0.0
4353.04 cufflinks 4.38201 178.542 OK 4353.04   16.7938 29.2056 High 0.0
23711.6 cufflinks 1.94535 376.142 OK 23711.6   10.7337 19.5221 Low 0.0
15005.9 cufflinks 0.0 241.794 OK 15005.9   11.1984 22.5451   0.0
82717.6 cufflinks 1.91951 698.404 OK 82717.6   10.8823 19.8451 High 0.0
48571.7 cufflinks 1.59641 544.699 OK 48571.7   8.36768 15.1389   0.0
902.598 cufflinks 1.94783 82.4753 OK 902.598   7.1754 12.403 Low 0.0
18078.4 cufflinks 0.0 264.784 OK 18078.4   13.712 27.6378   0.0
698.657 cufflinks 1.6658 72.1975 OK 698.657   6.22073 10.7756 Low 0.0