Protein Domain : IPR013155

Type:  Domain Name:  Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding
Description:  The aminoacyl-tRNA synthetase (also known as aminoacyl-tRNA ligase) catalyse the attachment of an amino acid to its cognate transfer RNA molecule in a highly specific two-step reaction. These proteins differ widely in size and oligomeric state, and have limited sequence homology []. The 20 aminoacyl-tRNA synthetases are divided into two classes, I and II. Class I aminoacyl-tRNA synthetases contain a characteristic Rossman fold catalytic domain and are mostly monomeric []. Class II aminoacyl-tRNA synthetases share an anti-parallel beta-sheet fold flanked by alpha-helices [], and are mostly dimeric or multimeric, containing at least three conserved regions [, , ]. However, tRNA binding involves an alpha-helical structure that is conserved between class I and class II synthetases. In reactions catalysed by the class I aminoacyl-tRNA synthetases, the aminoacyl group is coupled to the 2'-hydroxyl of the tRNA, while, in class II reactions, the 3'-hydroxyl site is preferred. The synthetases specific for arginine, cysteine, glutamic acid, glutamine, isoleucine, leucine, methionine, tyrosine, tryptophan and valine belong to class I synthetases. The synthetases specific for alanine, asparagine, aspartic acid, glycine, histidine, lysine, phenylalanine, proline, serine, and threonine belong to class-II synthetases. Based on their mode of binding to the tRNA acceptor stem, both classes of tRNA synthetases have been subdivided into three subclasses, designated 1a, 1b, 1c and 2a, 2b, 2c.This domain is found methionyl, valyl, leucyl and isoleucyl tRNA synthetases. It binds to the anticodon of the tRNA. Short Name:  M/V/L/I-tRNA-synth_anticd-bd

0 Child Features

0 Contains

1 Cross References

Identifier
PF08264

5 Found Ins

DB identifier Type Name
IPR004493 Family Leucyl-tRNA synthetase, class Ia, archaeal/eukaryotic cytosolic
IPR002301 Family Isoleucine-tRNA ligase
IPR002303 Family Valine-tRNA ligase
IPR002302 Family Leucine-tRNA ligase
IPR020791 Family Leucine-tRNA ligase, archaeal

2 GO Annotations

GO Term Gene Name Organism
GO:0000166 IPR013155
GO:0006418 IPR013155

1 Parent Features

DB identifier Type Name
IPR009080 Domain Aminoacyl-tRNA synthetase, class 1a, anticodon-binding

1185 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
157130 D8SPD3 PAC:15409754 Selaginella moellendorffii 1103  
445517 D8SJ90 PAC:15420275 Selaginella moellendorffii 1155  
77212 D8QTN5 PAC:15417053 Selaginella moellendorffii 1096  
141956 D8QWX7 PAC:15413568 Selaginella moellendorffii 960  
154280 D8SCM5 PAC:15401882 Selaginella moellendorffii 496  
427360 D8SZB8 PAC:15410349 Selaginella moellendorffii 184  
153639 D8S9D7 PAC:15401914 Selaginella moellendorffii 1155  
426245 D8SVU0 PAC:15406519 Selaginella moellendorffii 305  
437676 D8QNT8 PAC:15419827 Selaginella moellendorffii 1707  
443981 D8S601 PAC:15417664 Selaginella moellendorffii 1031  
410808 D8RFX9 PAC:15408586 Selaginella moellendorffii 1108  
evm.model.supercontig_113.23 PAC:16406032 Carica papaya 1077  
evm.model.supercontig_116.46 PAC:16406303 Carica papaya 804  
evm.model.supercontig_152.47 PAC:16409632 Carica papaya 975  
evm.model.supercontig_16.173 PAC:16410022 Carica papaya 864  
evm.model.supercontig_2.74 PAC:16412864 Carica papaya 1095  
evm.model.supercontig_32.1 PAC:16417318 Carica papaya 325  
29657.m000469 B9SUT5 PAC:16804968 Ricinus communis 1175  
29726.m004043 B9RT52 PAC:16806754 Ricinus communis 1102  
29765.m000722 B9SKB0 PAC:16808191 Ricinus communis 1087  
29777.m000279 B9SWL0 PAC:16808339 Ricinus communis 1065  
29842.m003545 B9RXG5 PAC:16810678 Ricinus communis 960  
29876.m000251 B9SZE7 PAC:16811966 Ricinus communis 1087  
27451.m000251 B9SYX0 PAC:16798378 Ricinus communis 247  
31633.m000035 B9TI41 PAC:16825134 Ricinus communis 130  
Cucsa.166330.1 PAC:16966154 Cucumis sativus 1045  
Cucsa.031250.1 PAC:16952271 Cucumis sativus 969  
Cucsa.044980.1 PAC:16953291 Cucumis sativus 1044  
Cucsa.044980.2 PAC:16953292 Cucumis sativus 976  
Cucsa.094940.1 A0A0A0KTX5 PAC:16957805 Cucumis sativus 1184  

6 Publications

First Author Title Year Journal Volume Pages PubMed ID
            8364025
            8274143
            1852601
            2053131
            10673435
            2203971